BS28142.complete Sequence
491 bp assembled on 2012-03-05
GenBank Submission: KX805959
> BS28142.complete
GAAGTTATCAGTCGACATGTGCCAGAACAAGATCAACACCAACAACACCA
TGACCATCAAATCGAACAAGAAGCTGTCCTACAGCGTGAAGAAACTGCTG
CAGAAGATCTTCAAGCAGCAACAGCGCGTCGAGGAGGAGCAGAACCTCAA
GAACGCCCTCAAGGCCAACTCTTTGGAGTCTCTGGAATCCATGGAAAACA
GCCGCAACGCCGATCTGGAATCCGCCTCCATCTGCGCCTCTCTGGAGTCC
TGCGAGAACGAGGCCAACGAGCGTCTCTCCCAGTCCTGCGAAATTGAGGA
CTACGACTTCGAGCAACTGCCCACCGTTCCCGTTCACTTCGTCCGCACCG
CTCACGGCACATTCTTCTGGACCGCCGTCTCCGATTTGCCAGCCGACAAC
GACCTCGTCGAGCCCCTCTACTGCAGCACCTCCAACGCCATCGCTATCCC
CCAGGATCGTTGGGTTCAGGCCTAAAAGCTTTCTAGACCAT
BS28142.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-RA | 459 | CG6099-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:53:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-RA | 759 | CG6099-RA | 86..547 | 16..477 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26024033..26024494 | 477..16 | 2310 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 04:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2430 | 9..154 | 134 | 61.3 | Plus |
BS28142.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:32 Download gff for
BS28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
m4-RA | 66..522 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:42 Download gff for
BS28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m4-BFM-RA | 87..543 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:59:51 Download gff for
BS28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m4-BFM-RA | 87..543 | 17..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:59:51 Download gff for
BS28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26024037..26024493 | 17..473 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:42 Download gff for
BS28142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21849759..21850215 | 17..473 | 100 | | Minus |
BS28142.pep Sequence
Translation from 16 to 474
> BS28142.pep
MCQNKINTNNTMTIKSNKKLSYSVKKLLQKIFKQQQRVEEEQNLKNALKA
NSLESLESMENSRNADLESASICASLESCENEANERLSQSCEIEDYDFEQ
LPTVPVHFVRTAHGTFFWTAVSDLPADNDLVEPLYCSTSNAIAIPQDRWV
QA*
BS28142.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m4-BFM-PA | 152 | CG6099-PA | 1..152 | 1..152 | 784 | 100 | Plus |
E(spl)malpha-BFM-PA | 138 | CG8337-PA | 1..138 | 1..152 | 217 | 39.8 | Plus |