Clone BS28144 Report

Search the DGRC for BS28144

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:281
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG15756-RA
Protein status:BS28144.pep: gold
Sequenced Size:929

Clone Sequence Records

BS28144.complete Sequence

929 bp assembled on 2012-03-05

GenBank Submission: KX805307

> BS28144.complete
GAAGTTATCAGTCGACATGTTCCAACATTTCAAGCAGATCTATGCTGGGC
TGGGTGTCAGTTCTCTGATGGTCACCCTGGCCATCCTACTGCTCCTTCAG
CCCGTGGATGCACGCTGGACTCGCAGACCCAGGCGTACCACCACGCCAAG
GAGCACCACAAGCATAACCACCGCGAATCCGGATCGTCATCAGCATGTGC
ACCACTGGCCACCATTGGTGGCACCACCGCCACAGCCTCAACCACAGCCA
CCAGTGGTTGTGGTGCAGAAGCCAAGTCACACGGAGACCAGTCCCCGTCT
CGTCGATAGCTTCGATCAGAGATCACTGGACGGGCAGTACGAGTTCAGAT
ATCAGCTGGATAATGGCAACACGCGATATGAGCGCGCCTACTGGCTGCCC
GTGGGCAAGGATCTCGTTCTGGCCAAGAAGGGATACTATTCGGTGCCACT
GCCAAACGACAAGTACTCCACGGTGTTCTACACCGCCGATCATCGTGGCT
ACCATGTGGACATGCAGACATTATCCGTAGAGCAGCCGCTATTGCCGCGC
AGCCTGGAAGTGCCCGGAGTGGAAAGGGATGTGGGATCGGGAATGGGAAT
GGGCACCGGAATAGCCACGGGTACGGGGACTAAGCGAAATTCAATAAGCG
ACCCGGAGCGTAACGAGCTGCCTGTGGAAGTGGAAGTGAATGAGGCTGAG
GATGTGGATGTGGATGTGGACGCAAGTGATGCTGGCACCGAGCTGGTTCC
TAATGCTGTAAACCAAGTCGAAACCGAAACCGAACCATCAACTTTGGCCA
ACGACATTTTGGCAACTGGAGCACCAGCCGACAGCCATGATGATGATCAC
GATGACGATGGCGATGAGGATGGGGATGACGATGTTGATGATGATGAAGG
CGCCTCAAACTGAAAGCTTTCTAGACCAT

BS28144.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756-RA 897 CG15756-PA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756-RA 1369 CG15756-RA 72..974 15..917 4515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13534471..13534804 15..348 1670 100 Plus
X 23542271 X 13535098..13535337 516..755 1200 100 Plus
X 23542271 X 13534863..13535032 346..515 850 100 Plus
X 23542271 X 13535645..13535807 755..917 815 100 Plus
Blast to na_te.dros performed 2014-11-28 04:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 1967..2036 191..258 120 65.7 Plus

BS28144.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:33 Download gff for BS28144.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 6..896 22..912 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:47 Download gff for BS28144.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 79..969 22..912 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:05 Download gff for BS28144.complete
Subject Subject Range Query Range Percent Splice Strand
CG15756-RA 79..969 22..912 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:05 Download gff for BS28144.complete
Subject Subject Range Query Range Percent Splice Strand
X 13534478..13534804 22..348 100 -> Plus
X 13534866..13535032 349..515 100 -> Plus
X 13535098..13535336 516..754 100 -> Plus
X 13535645..13535802 755..912 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:47 Download gff for BS28144.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13428511..13428837 22..348 100 -> Plus
arm_X 13428899..13429065 349..515 100 -> Plus
arm_X 13429131..13429369 516..754 100 -> Plus
arm_X 13429678..13429835 755..912 100   Plus

BS28144.pep Sequence

Translation from 16 to 912

> BS28144.pep
MFQHFKQIYAGLGVSSLMVTLAILLLLQPVDARWTRRPRRTTTPRSTTSI
TTANPDRHQHVHHWPPLVAPPPQPQPQPPVVVVQKPSHTETSPRLVDSFD
QRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGYYSVPLPNDKY
STVFYTADHRGYHVDMQTLSVEQPLLPRSLEVPGVERDVGSGMGMGTGIA
TGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVNQ
VETETEPSTLANDILATGAPADSHDDDHDDDGDEDGDDDVDDDEGASN*

BS28144.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15756-PA 298 CG15756-PA 1..298 1..298 1584 100 Plus
Cpr12A-PA 173 CG15757-PA 18..123 80..185 223 41.5 Plus