BS28144.complete Sequence
929 bp assembled on 2012-03-05
GenBank Submission: KX805307
> BS28144.complete
GAAGTTATCAGTCGACATGTTCCAACATTTCAAGCAGATCTATGCTGGGC
TGGGTGTCAGTTCTCTGATGGTCACCCTGGCCATCCTACTGCTCCTTCAG
CCCGTGGATGCACGCTGGACTCGCAGACCCAGGCGTACCACCACGCCAAG
GAGCACCACAAGCATAACCACCGCGAATCCGGATCGTCATCAGCATGTGC
ACCACTGGCCACCATTGGTGGCACCACCGCCACAGCCTCAACCACAGCCA
CCAGTGGTTGTGGTGCAGAAGCCAAGTCACACGGAGACCAGTCCCCGTCT
CGTCGATAGCTTCGATCAGAGATCACTGGACGGGCAGTACGAGTTCAGAT
ATCAGCTGGATAATGGCAACACGCGATATGAGCGCGCCTACTGGCTGCCC
GTGGGCAAGGATCTCGTTCTGGCCAAGAAGGGATACTATTCGGTGCCACT
GCCAAACGACAAGTACTCCACGGTGTTCTACACCGCCGATCATCGTGGCT
ACCATGTGGACATGCAGACATTATCCGTAGAGCAGCCGCTATTGCCGCGC
AGCCTGGAAGTGCCCGGAGTGGAAAGGGATGTGGGATCGGGAATGGGAAT
GGGCACCGGAATAGCCACGGGTACGGGGACTAAGCGAAATTCAATAAGCG
ACCCGGAGCGTAACGAGCTGCCTGTGGAAGTGGAAGTGAATGAGGCTGAG
GATGTGGATGTGGATGTGGACGCAAGTGATGCTGGCACCGAGCTGGTTCC
TAATGCTGTAAACCAAGTCGAAACCGAAACCGAACCATCAACTTTGGCCA
ACGACATTTTGGCAACTGGAGCACCAGCCGACAGCCATGATGATGATCAC
GATGACGATGGCGATGAGGATGGGGATGACGATGTTGATGATGATGAAGG
CGCCTCAAACTGAAAGCTTTCTAGACCAT
BS28144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:54:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15756-RA | 897 | CG15756-PA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:54:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15756-RA | 1369 | CG15756-RA | 72..974 | 15..917 | 4515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:54:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13534471..13534804 | 15..348 | 1670 | 100 | Plus |
X | 23542271 | X | 13535098..13535337 | 516..755 | 1200 | 100 | Plus |
X | 23542271 | X | 13534863..13535032 | 346..515 | 850 | 100 | Plus |
X | 23542271 | X | 13535645..13535807 | 755..917 | 815 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:54:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 1967..2036 | 191..258 | 120 | 65.7 | Plus |
BS28144.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:33 Download gff for
BS28144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15756-RA | 6..896 | 22..912 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:47 Download gff for
BS28144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15756-RA | 79..969 | 22..912 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:05 Download gff for
BS28144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15756-RA | 79..969 | 22..912 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:05 Download gff for
BS28144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13534478..13534804 | 22..348 | 100 | -> | Plus |
X | 13534866..13535032 | 349..515 | 100 | -> | Plus |
X | 13535098..13535336 | 516..754 | 100 | -> | Plus |
X | 13535645..13535802 | 755..912 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:47 Download gff for
BS28144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13428511..13428837 | 22..348 | 100 | -> | Plus |
arm_X | 13428899..13429065 | 349..515 | 100 | -> | Plus |
arm_X | 13429131..13429369 | 516..754 | 100 | -> | Plus |
arm_X | 13429678..13429835 | 755..912 | 100 | | Plus |
BS28144.pep Sequence
Translation from 16 to 912
> BS28144.pep
MFQHFKQIYAGLGVSSLMVTLAILLLLQPVDARWTRRPRRTTTPRSTTSI
TTANPDRHQHVHHWPPLVAPPPQPQPQPPVVVVQKPSHTETSPRLVDSFD
QRSLDGQYEFRYQLDNGNTRYERAYWLPVGKDLVLAKKGYYSVPLPNDKY
STVFYTADHRGYHVDMQTLSVEQPLLPRSLEVPGVERDVGSGMGMGTGIA
TGTGTKRNSISDPERNELPVEVEVNEAEDVDVDVDASDAGTELVPNAVNQ
VETETEPSTLANDILATGAPADSHDDDHDDDGDEDGDDDVDDDEGASN*
BS28144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15756-PA | 298 | CG15756-PA | 1..298 | 1..298 | 1584 | 100 | Plus |
Cpr12A-PA | 173 | CG15757-PA | 18..123 | 80..185 | 223 | 41.5 | Plus |