BS28149.complete Sequence
989 bp assembled on 2012-03-05
GenBank Submission: KX801835
> BS28149.complete
GAAGTTATCAGTCGACATGTCAGCGGGTGTGGGTGGCGGAGGGAGCATTA
CCACCGAGCACCACAGTCGCCTCTACTTCCTCAACTCGCCGACGGCGCCG
CTCACCGCCCGCGATCCGTTCTTCATCAAGCCGGAGTATCTCAGCTATGA
GAGTCCCATGCACCATGCCCTCTACTCGGGCAATCGGGGCCTCTTAGAGT
ACAACAACTATACCAGTTCGGCGGCCGCGGCGGCAGCCGTTGCCTCATCC
GTAGCCACCTCCGTATCTGTGTCCGGTTCGGGTTCGGGATCAGGATCCGC
GGGAACCGCAGCCAGTGCCTCAGCAAGTGCAGCGAACAGCGGTGGCAGTG
CGTCTGGAACGGCGGTGCTGAGCCTCGAGAACAATTTCGCACAGCAGGGT
AATCCCCACCAGCAGCAGCAGCAGCAGCAACAGCAGGGCAATCCCCACCA
GGAGGTACTCCAGCAGCAGCAGCAGCAGCACCCCCTGCATCATCATTTGT
CCGCTGGCGTTGTGGTCGAGGCCAGTCAACTTGGTGGCGTTCCGGGTCTT
GCCAATCTTGGCGTGCCACATCTCAGCGCCCAGCAGTCAGTGACGCAGCA
GGGCCAATCCTCGAGAGCGCAAAAGGCCGCCCGCCGGAGAAGCAACGAAT
CGATTGAGGCCAGGGAAAGGCGGCTGGAGAGAAACGCCGCCCGGATGCGG
GACAAACGGGCCAAGGAATCGGAGGCCGAGTACCGCGTGCGTTTGGCCAA
GAATGCGGAGGCGAATCGAGTGCGACGCCAGAACGAAACGGAAGTACAAA
GAACCCTAAGACTGATGAAGAATGCAGCGCGGCAGCGACTGCGCCGCGCC
TCGGAAACCGTCGAGGAGCGTAAGAAGCGGCTGGCCAAGGCCGCCGAACG
GATGCGAATCGCCCGGGCCAGTGCGCCCAAGGTCATCAAGCCGCCGCTGG
CCGACAGGCTAAAGGGTTACTAAAAGCTTTCTAGACCAT
BS28149.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:56:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14440-RB | 957 | CG14440-PB | 1..957 | 17..973 | 4785 | 100 | Plus |
| CG14440-RA | 957 | CG14440-PA | 1..957 | 17..973 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14440-RB | 1802 | CG14440-RB | 283..1239 | 17..973 | 4785 | 100 | Plus |
| CG14440-RA | 2638 | CG14440-RA | 219..1175 | 17..973 | 4785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6697329..6698285 | 973..17 | 4785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:56:17 has no hits.
BS28149.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:35 Download gff for
BS28149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 219..1173 | 17..971 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:06 Download gff for
BS28149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 219..1173 | 17..971 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:43 Download gff for
BS28149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 219..1173 | 17..971 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:43 Download gff for
BS28149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6697331..6698285 | 17..971 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:06 Download gff for
BS28149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6591364..6592318 | 17..971 | 100 | | Minus |
BS28149.pep Sequence
Translation from 16 to 972
> BS28149.pep
MSAGVGGGGSITTEHHSRLYFLNSPTAPLTARDPFFIKPEYLSYESPMHH
ALYSGNRGLLEYNNYTSSAAAAAAVASSVATSVSVSGSGSGSGSAGTAAS
ASASAANSGGSASGTAVLSLENNFAQQGNPHQQQQQQQQQGNPHQEVLQQ
QQQQHPLHHHLSAGVVVEASQLGGVPGLANLGVPHLSAQQSVTQQGQSSR
AQKAARRRSNESIEARERRLERNAARMRDKRAKESEAEYRVRLAKNAEAN
RVRRQNETEVQRTLRLMKNAARQRLRRASETVEERKKRLAKAAERMRIAR
ASAPKVIKPPLADRLKGY*
BS28149.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14440-PB | 318 | CG14440-PB | 1..318 | 1..318 | 1582 | 100 | Plus |
| CG14440-PA | 318 | CG14440-PA | 1..318 | 1..318 | 1582 | 100 | Plus |
| CG14442-PD | 529 | CG14442-PD | 51..240 | 118..302 | 391 | 49 | Plus |
| CG14442-PB | 952 | CG14442-PB | 51..240 | 118..302 | 391 | 49 | Plus |
| CG14442-PE | 958 | CG14442-PE | 51..240 | 118..302 | 391 | 49 | Plus |
