BS28150.complete Sequence
842 bp assembled on 2012-03-05
GenBank Submission: KX802449
> BS28150.complete
GAAGTTATCAGTCGACATGACCCAAAGGATTGAAAATGTAGTGAAAGGAC
TAGTGATGGTGGTTCTGGCTTTTATGGTGGCACAAACGGTGTCCGATTGC
AATGTCTGTCAATCAAATCAAGTGGCCTGCATCAACTCCACGTCCTTTTA
CTTGTGTTTTGGAGATGGAACTCCACATCGTGATCAGCTATACCATTGCT
TAGAAGGATTTGACTGCACCAATCTCACGGCGATTTGTGTTCAGAAGAGC
AGCCAGCGGCCTCCCAGTTGCGGGGATACCTCTCAATGTGGCCAATGTAG
TGCCAATCGGAATTATCTATTCGCGTGCCAGAGTCGTGGTATCTTTCAGA
TGTGCTATGGAGCCACTAGACCCACTGGGCAATTTGGTTACTGCCCCACG
GGTACGGTTTGTGATGCCAGCAGCACTGCGATTTGTGTGCCTGAGGTCGC
GGGTCAAACGCTGACCTGTGACATAAATGACGAACTGGTGGACACCACCA
CTGCAGCGTCCGTGACCACCGAAACTACTGGCGGTACCACTGAAAGTAGC
ACTGAGAGCACAACTGAAAGCAGCACCGATTCAACTGTAACCACCGAGAC
GCCCACTACAGTGACGCCTCTAACTCCTGCCCAGATGTGTGCCCAAAGGA
ATGCCACTGGTCTTTTTCCCGTCATTCCTGCGGATCCCTATTGCCAGCGC
TACATTAGTTGTTACTTTCAAAAGAACGTTCTTATCAAATCTGCCGAATA
TAACTGTCCCACAGATTCCTGGTTTGTTGCTCAAACTCAGAGTTGCGTCT
ACGTAAATCCCGGCTACTGTCTTTAAAAGCTTTCTAGACCAT
BS28150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:56:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34427-RB | 810 | CG34427-PB | 1..810 | 17..826 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:56:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34427-RB | 865 | CG34427-RB | 16..825 | 17..826 | 4050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:56:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8805043..8805579 | 163..699 | 2685 | 100 | Plus |
3L | 28110227 | 3L | 8805645..8805772 | 699..826 | 640 | 100 | Plus |
3L | 28110227 | 3L | 8804878..8804984 | 58..164 | 535 | 100 | Plus |
3L | 28110227 | 3L | 8804779..8804822 | 17..60 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:56:43 has no hits.
BS28150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:35 Download gff for
BS28150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34427-RB | 16..823 | 17..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:11 Download gff for
BS28150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34427-RB | 16..823 | 17..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:52 Download gff for
BS28150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34427-RB | 16..823 | 17..824 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:52 Download gff for
BS28150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8804779..8804820 | 17..58 | 100 | -> | Plus |
3L | 8804879..8804984 | 59..164 | 100 | -> | Plus |
3L | 8805045..8805579 | 165..699 | 100 | -> | Plus |
3L | 8805646..8805770 | 700..824 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:11 Download gff for
BS28150.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8797879..8797920 | 17..58 | 100 | -> | Plus |
arm_3L | 8797979..8798084 | 59..164 | 100 | -> | Plus |
arm_3L | 8798145..8798679 | 165..699 | 100 | -> | Plus |
arm_3L | 8798746..8798870 | 700..824 | 100 | | Plus |
BS28150.pep Sequence
Translation from 16 to 825
> BS28150.pep
MTQRIENVVKGLVMVVLAFMVAQTVSDCNVCQSNQVACINSTSFYLCFGD
GTPHRDQLYHCLEGFDCTNLTAICVQKSSQRPPSCGDTSQCGQCSANRNY
LFACQSRGIFQMCYGATRPTGQFGYCPTGTVCDASSTAICVPEVAGQTLT
CDINDELVDTTTAASVTTETTGGTTESSTESTTESSTDSTVTTETPTTVT
PLTPAQMCAQRNATGLFPVIPADPYCQRYISCYFQKNVLIKSAEYNCPTD
SWFVAQTQSCVYVNPGYCL*
BS28150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34427-PB | 269 | CG34427-PB | 1..269 | 1..269 | 1460 | 100 | Plus |
CG14958-PA | 145 | CG14958-PA | 6..145 | 11..154 | 359 | 46.5 | Plus |
CG34426-PA | 296 | CG34426-PA | 1..289 | 12..267 | 252 | 30.2 | Plus |
CG13312-PA | 342 | CG13312-PA | 14..244 | 12..268 | 216 | 26.5 | Plus |
CG13308-PB | 233 | CG13308-PB | 12..221 | 15..268 | 212 | 28.5 | Plus |