BS28153.complete Sequence
470 bp assembled on 2012-03-05
GenBank Submission: KX806333
> BS28153.complete
GAAGTTATCAGTCGACATGACCATCTTTAACCTGTACATATTCGACAAGT
TCGGAACACTGCTCCACTACGCAGAATGGAATCGCACCAAGAAATCGGGC
ATCACACGCGAGGAAGAAGCCAAACTCACCTACGGAATGCTCTTCTCCAT
AAAGTCCTTCGTCAGTAAGATATCGCCACACGATCCCAAGGAGGGCTTCC
TTTACTACAAGACCAATCGCTACGCCCTGCATTATCTGGAAACTCCCTCT
GGATTAAAGTTCGTTCTCAACACGGACACGACGGCCATCAATGTGAAGGA
GCTGCTACAGCAGTTGTACGCCAAGGTGTGGGTAGAGTTCGTCGTGCGAG
ATCCACTGTGGACACCCGGCACGGTGGTCACCTCGGAGCTGTTCCAGTCC
AAGCTCGATGAGTTCGTCAGGCAGTCACCCATCTTCGGCATTCGCAATAT
ATAAAAGCTTTCTAGACCAT
BS28153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:57:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bet5-RA | 438 | CG1359-PA | 1..438 | 17..454 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:57:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bet5-RA | 1051 | CG1359-RA | 125..563 | 17..455 | 2195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:57:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30180802..30180998 | 259..455 | 985 | 100 | Plus |
3R | 32079331 | 3R | 30180509..30180653 | 116..260 | 725 | 100 | Plus |
3R | 32079331 | 3R | 30180356..30180455 | 17..116 | 500 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5 | 4856 | G5 G5_DM 4856bp | 2826..2855 | 173..202 | 105 | 83.3 | Plus |
BS28153.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:37 Download gff for
BS28153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bet5-RA | 75..510 | 17..452 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:22 Download gff for
BS28153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bet5-RA | 125..560 | 17..452 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:01:08 Download gff for
BS28153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bet5-RA | 125..560 | 17..452 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:01:08 Download gff for
BS28153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30180356..30180454 | 17..115 | 100 | -> | Plus |
3R | 30180509..30180651 | 116..258 | 100 | -> | Plus |
3R | 30180802..30180995 | 259..452 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:22 Download gff for
BS28153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26006078..26006176 | 17..115 | 100 | -> | Plus |
arm_3R | 26006231..26006373 | 116..258 | 100 | -> | Plus |
arm_3R | 26006524..26006717 | 259..452 | 100 | | Plus |
BS28153.pep Sequence
Translation from 16 to 453
> BS28153.pep
MTIFNLYIFDKFGTLLHYAEWNRTKKSGITREEEAKLTYGMLFSIKSFVS
KISPHDPKEGFLYYKTNRYALHYLETPSGLKFVLNTDTTAINVKELLQQL
YAKVWVEFVVRDPLWTPGTVVTSELFQSKLDEFVRQSPIFGIRNI*
BS28153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bet5-PA | 145 | CG1359-PA | 1..145 | 1..145 | 760 | 100 | Plus |