BS28158.complete Sequence
518 bp assembled on 2012-03-05
GenBank Submission: KX806202
> BS28158.complete
GAAGTTATCAGTCGACATGGATGTCACGAAAACATCAAGCGCTGAGGAAA
CCGAAAACACGGAAAATACTAGTCATGCTAAAAACATTAACGAAAACGTA
TCAAAATTTTATGAAACTATTGGAAATATTTCCCGAAATATGCGCAAGGA
CGATTGGACATATCTACAACGCCATCCAGAGATCCGAGCCATAATTCGGG
TCATTACAGCCGAGGCGGTTAAGGCAAAGCCATCGAATATCTACCAATTT
ACAGCCAATTTATTTGGAAGCGAAAGAGACGAGGAGATGGTAGAAAAGAT
AAACAAGCAACTTAAGTGGTTGGAAGAGCAGTTGCGAGGGGGTACGTGGA
ATCCTGACGAAGGATGTGCCCCGTTTCCAGAATCCAGCGAGACTTCTTCG
GAAACTAAATGCCAAACTAATTTTAATACCACTGCGAGTTTCAACATACC
CGAAAAGCAAGTTTGCCCTGAAAATTATAAGCCAGATTGCAAGAAATGTT
AAAAGCTTTCTAGACCAT
BS28158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34021-RA | 486 | CG34021-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:55:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34021-RA | 760 | CG34021-RA | 98..585 | 17..504 | 2440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12336987..12337268 | 17..298 | 1410 | 100 | Plus |
2R | 25286936 | 2R | 12337336..12337543 | 297..504 | 1040 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:55:19 has no hits.
BS28158.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:34 Download gff for
BS28158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34021-RA | 6..489 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:54 Download gff for
BS28158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34021-RA | 98..581 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:23 Download gff for
BS28158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34021-RA | 98..581 | 17..500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:23 Download gff for
BS28158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12336987..12337268 | 17..298 | 100 | -> | Plus |
2R | 12337338..12337539 | 299..500 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:54 Download gff for
BS28158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8224492..8224773 | 17..298 | 100 | -> | Plus |
arm_2R | 8224843..8225044 | 299..500 | 100 | | Plus |
BS28158.pep Sequence
Translation from 16 to 501
> BS28158.pep
MDVTKTSSAEETENTENTSHAKNINENVSKFYETIGNISRNMRKDDWTYL
QRHPEIRAIIRVITAEAVKAKPSNIYQFTANLFGSERDEEMVEKINKQLK
WLEEQLRGGTWNPDEGCAPFPESSETSSETKCQTNFNTTASFNIPEKQVC
PENYKPDCKKC*
BS28158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34021-PA | 161 | CG34021-PA | 1..161 | 1..161 | 863 | 100 | Plus |
CG34012-PA | 158 | CG34012-PA | 24..124 | 30..128 | 199 | 42.6 | Plus |