BS28159.complete Sequence
1346 bp assembled on 2012-03-05
GenBank Submission: KX804550
> BS28159.complete
GAAGTTATCAGTCGACATGTTTGATAATAAAAGCGATAAGCTGCTGCTTG
AAATGGAGGAAGACGATGCTGCTCCCGAGGATCAGCACCCCCGCTGCGAG
CACGGGCCGACGGTTTTGTTCAACCGACAATCCCAACTTCCCGACCAGGG
TTATTATGCCTGTTCAGCCCATCGGGACTCAAAACTCTGCAATTATCACT
TGCCAGCGGATCAGTGGAAGGGTCAGACCACCAGGACGGCACTCACCAAA
AGGGACTATCCCTTGCCATGCAGGAAACCAGCTAATCCCGCCATTTGTGA
TCCCACACTAAGCCTTACAGCGCTTTCCCAGGACAAAGTCAATGCCCAAT
ACTTTTTTGATGAAGCTGCGCTCAACTTCTTGGCAAATCAGTGTGAGCAT
ATAGGAGCTAGCAAGGTTATATGCATGGGCGCACCGCGTCTACACTTCCA
TCTGCGACACAAATTGCAAAGTTTTCTGTTGGATTTGGATGAGAGATTTG
CCGAATATCTGGGTCCTGAAGAGTTCTGTCTGTACAATATGTGCAATAAT
CACTTCTTTTACGATCGAACGCCCTTTGAACAATTCCTGGCAGGTACCAG
TTCCGATCGACTGGTGATTGTAACAGATCCTCCATTTGGCTGTCGCACTG
AACTGATTTCGCACACCCTGCGCAGCCTTAGAAAACTGCATAATCAAATC
AACCGATTGCCATCCACTCCACTGTCCATATTCTGGATATATCCCTATTA
TTCAGCTAACCACATCAGGCAGGAAATGCCTGAGCTTGAAATGTGTGAAT
ACAGGATCAATTACACTAATCACCTTAGATATACGAATGTGGGCAAGCAG
AGTCGGTTTTGTGGATCACCCGTGAGGCTGTTCACCAACGTGCCACTGCG
ACTTCTTCAATTGCCCCCTGAAGAGGGCTATAAGTACTGCCAAAAATGCG
ATTGTTACACTGCCAAGGAGAACCTGCACTGCAACCGCTGCGGGAAGTGC
CCCTCGGTGAATGGCCAAACGTACAAGCACTGCGAGTCCTGCGATGCCTG
TGTGAAACCCAACTATGTGCATTGCTCCGACTGTAGAAGGTGCACGCAGA
AGGAGGGACACAACTGCTCCTTCTATCAGACCAAACAACACTGCTGGATG
TGCGGCCAGAAAGGCCATATCGAAACCAAGTGCCCAAACTTCCGCAAGAG
AAAGACGAACTATACCAAAGGCTGCCTTTTGTGCGGCAAACGAAATCACA
GGGAAAAGCGATGCTCGTACCGCTCAAAATACTTCAGGGAACAGTGTTTT
ATGAACGAAACAACAATTCAGTGTCTTTAAAAGCTTTCTAGACCAT
BS28159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12863-RA | 1314 | CG12863-PA | 1..1314 | 17..1330 | 6570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:55:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12863-RA | 1417 | CG12863-RA | 69..1382 | 17..1330 | 6570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14619833..14620566 | 1330..597 | 3670 | 100 | Minus |
| 2R | 25286936 | 2R | 14620858..14621252 | 411..17 | 1975 | 100 | Minus |
| 2R | 25286936 | 2R | 14620618..14620808 | 600..410 | 955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:55:46 has no hits.
BS28159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:34 Download gff for
BS28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 67..1372 | 23..1328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:59 Download gff for
BS28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 75..1380 | 23..1328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:00:32 Download gff for
BS28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 75..1380 | 23..1328 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:00:32 Download gff for
BS28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14619835..14620562 | 601..1328 | 100 | <- | Minus |
| 2R | 14620618..14620806 | 412..600 | 100 | <- | Minus |
| 2R | 14620858..14621246 | 23..411 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:59 Download gff for
BS28159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10507340..10508067 | 601..1328 | 100 | <- | Minus |
| arm_2R | 10508123..10508311 | 412..600 | 100 | <- | Minus |
| arm_2R | 10508363..10508751 | 23..411 | 100 | | Minus |
BS28159.pep Sequence
Translation from 16 to 1329
> BS28159.pep
MFDNKSDKLLLEMEEDDAAPEDQHPRCEHGPTVLFNRQSQLPDQGYYACS
AHRDSKLCNYHLPADQWKGQTTRTALTKRDYPLPCRKPANPAICDPTLSL
TALSQDKVNAQYFFDEAALNFLANQCEHIGASKVICMGAPRLHFHLRHKL
QSFLLDLDERFAEYLGPEEFCLYNMCNNHFFYDRTPFEQFLAGTSSDRLV
IVTDPPFGCRTELISHTLRSLRKLHNQINRLPSTPLSIFWIYPYYSANHI
RQEMPELEMCEYRINYTNHLRYTNVGKQSRFCGSPVRLFTNVPLRLLQLP
PEEGYKYCQKCDCYTAKENLHCNRCGKCPSVNGQTYKHCESCDACVKPNY
VHCSDCRRCTQKEGHNCSFYQTKQHCWMCGQKGHIETKCPNFRKRKTNYT
KGCLLCGKRNHREKRCSYRSKYFREQCFMNETTIQCL*
BS28159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12863-PA | 437 | CG12863-PA | 1..437 | 1..437 | 2471 | 100 | Plus |
