BS28162.complete Sequence
453 bp assembled on 2012-03-05
GenBank Submission: KX803632
> BS28162.complete
GAAGTTATCAGTCGACATGTCTAAAGGCACGGGACCCTTGTCTAAGTTGT
ACAATATTACCATCAGTACTATTGATAAATTTGTTCCAGGCGCAGTTCAG
CCACTTTGGCAATCCCCAGCTGGACCCCGTACTGTGTTTTTTTGGGCACC
AGCGTTTAAATGGTCCTTGGTGCTGGCTGGGCTGAGCGATACGCTAAGTC
GTCCTCCTGCCAATATATCGCTGAATCAATGCGGCTCCTTGGCAGTCACG
GGCTTAATTTGGTCTCGCTACTCAGTGGTTATCACACCCAAGAACTACAA
TCTTCTGGCCGTCAACATAGCCGTCTTTCTCATCCAGGGTTATCTAATGG
TCAAGCACCTAAGGTGGCGCAGCGAGAACTCTCGGAATGCGGTGTTCAAT
CATTCGCACTACCCAATCAAATCAGGAGATGATTGGTGAGCTTTCTAGAC
CAT
BS28162.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:59:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-RB | 423 | CG32832-PB | 1..421 | 17..437 | 2105 | 100 | Plus |
CG32832-RA | 423 | CG32832-PA | 1..421 | 17..437 | 2105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:59:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-RB | 772 | CG32832-RB | 75..495 | 17..437 | 2105 | 100 | Plus |
CG32832-RA | 675 | CG32832-RA | 75..495 | 17..437 | 2105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16878603..16878877 | 437..163 | 1375 | 100 | Minus |
2L | 23513712 | 2L | 16879110..16879216 | 123..17 | 535 | 100 | Minus |
2L | 23513712 | 2L | 16879017..16879058 | 163..122 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:59:33 has no hits.
BS28162.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:39 Download gff for
BS28162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 60..480 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:47 Download gff for
BS28162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 75..495 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:01:53 Download gff for
BS28162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32832-RA | 75..495 | 17..437 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:01:53 Download gff for
BS28162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16878603..16878876 | 164..437 | 100 | <- | Minus |
2L | 16879017..16879057 | 123..163 | 100 | <- | Minus |
2L | 16879111..16879216 | 17..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:47 Download gff for
BS28162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16878603..16878876 | 164..437 | 100 | <- | Minus |
arm_2L | 16879017..16879057 | 123..163 | 100 | <- | Minus |
arm_2L | 16879111..16879216 | 17..122 | 100 | | Minus |
BS28162.pep Sequence
Translation from 16 to 438
> BS28162.pep
MSKGTGPLSKLYNITISTIDKFVPGAVQPLWQSPAGPRTVFFWAPAFKWS
LVLAGLSDTLSRPPANISLNQCGSLAVTGLIWSRYSVVITPKNYNLLAVN
IAVFLIQGYLMVKHLRWRSENSRNAVFNHSHYPIKSGDDW*
BS28162.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32832-PB | 140 | CG32832-PB | 1..140 | 1..140 | 747 | 100 | Plus |
CG32832-PA | 140 | CG32832-PA | 1..140 | 1..140 | 747 | 100 | Plus |
CG9399-PD | 154 | CG9399-PD | 22..126 | 2..107 | 338 | 61.3 | Plus |
CG9399-PA | 154 | CG9399-PA | 22..126 | 2..107 | 338 | 61.3 | Plus |
CG9399-PB | 154 | CG9399-PB | 22..126 | 2..107 | 338 | 61.3 | Plus |