BS28165.complete Sequence
515 bp assembled on 2012-03-05
GenBank Submission: KX806013
> BS28165.complete
GAAGTTATCAGTCGACATGCGTCACTTTACCGTGCTAGTATCCTGCATCC
TGATAGTTATATTGCCATGCGTGTTAGGGGCTCACAGGACAGCTCTCAAG
AGTCATTATAGAAGCTTTGTGAAACCAAAGCAGAATGTCATACGGGCTAG
AACCAATCAAACAACACAACTTACATTAGGAGACTATACGGAAAACTTTT
ATAAACACTGCATGGATATTTTCAAAGAGAAAAACTTGGTTGGTAAAGTG
ATCCATGGCATGATCAGTGGAATTTTAGACAGGCTCAATGAAGTGTGCCT
CGACAAGCCCATTCACCCACTTATCCACAAAGTTTTCACGGAAATCCTTC
TCTGTGGCGGAAGCATGTCGGATGCAATCGATAGCGTCATTGACATATTA
TTTGGAAATTTGGAAAGAAATTGCAGGGAGAGGCCTGGATTCAATAGCTA
TTATATTTTAACCAGTGCGGAAAACGAAATAGTTGAATCAAAAGGTTAAA
AGCTTTCTAGACCAT
BS28165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:00:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-RA | 483 | CG42484-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:00:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-RA | 685 | CG42484-RA | 30..513 | 17..500 | 2420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:59:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7979760..7980241 | 500..19 | 2410 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 05:00:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1b | 5171 | Rt1b RT1B 5150bp | 3972..4068 | 73..169 | 125 | 58.8 | Plus |
BS28165.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:40 Download gff for
BS28165.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..510 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:49 Download gff for
BS28165.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..510 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:02:01 Download gff for
BS28165.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..510 | 17..497 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:02:01 Download gff for
BS28165.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7979763..7980242 | 17..497 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:49 Download gff for
BS28165.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3805485..3805964 | 17..497 | 99 | | Minus |
BS28165.pep Sequence
Translation from 16 to 498
> BS28165.pep
MRHFTVLVSCILIVILPCVLGAHRTALKSHYRSFVKPKQNVIRARTNQTT
QLTLGDYTENFYKHCMDIFKEKNLVGKVIHGMISGILDRLNEVCLDKPIH
PLIHKVFTEILLCGGSMSDAIDSVIDILFGNLERNCRERPGFNSYYILTS
AENEIVESKG*
BS28165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-PA | 160 | CG42484-PA | 1..160 | 1..160 | 838 | 100 | Plus |