BS28166.complete Sequence
1865 bp assembled on 2012-04-11
GenBank Submission: KX805603
> BS28166.complete
GAAGTTATCAGTCGACATGCTGCTACTTCGCCGTTGCCACAAGTTAAAGT
TGCGTCCATTGGCCCGTCTTTGCTCCGCCGAATTGATACATAAGGATGGC
TTCATCGAGAAGCTGCGCCATAGTTTCGATGAAGAGGAGCGTAGTAATGT
GGTGGTGCCCACGTTCAAAAAGGCTATGCTCTATCCGGATGAGATCGCCG
TGAAAGACATCAATGGGGAGTACACTTATTTTCAATTGTATATGGCCGCC
AAACGTCTGGGCATTCAGATCTCAAATATATGTGGCGGCGCCGCGCTTTC
GAATGTAACATACTTGTGCTCGAACAACGCCCTGTGGATAGCTATACAAT
GGAGCTGTTGGATTTCCGGACAAGTGGCAGTTCCACTGGAATCCGGCCAG
GCGATAGATCAATTGCAACGGCAGGCATCGAACTGCAAGACCAAGCTACT
GATAGCCACTAAGGAATTTGAGTCACTTGCCCAGGAATTGTCGCAGGGTG
TGAAATCAGCTACCATCATATTGGATCACTCATTTCTCCCGACGGCGGAG
AGTGTATCCTCGACATCGATGTATGCCAAACAGCTGGTGGCGATCCAGGG
TGTTATCGTAACGGAAAATACGTTTCCAAACGATTTCTATTCCAAGGCAC
CAGCCATGCTGATCTATACGCCCAATGCGGTCAATAGTCCCAAGCCAGTG
TTGTTGACCCATCGGAATATCGAAGCTCAGATGCGATGTTTGATCGGAAC
TTGGCATTTGGGACCTACAGACTGTATGCTGCCAATACTATCCATGAATC
GAATGCATGCCGCCTTGGCAGCAGTTCTCAGTGTGGGCGGTAATGTGGTG
TTGCAGCAAAAATTCGATGGTCACAATGCGTGGAGTGCTCTATTGGGCAT
AAATAGCCCATCCAAGCAACGGGTCACCCTCTTTTTGGCCATGCCAATTG
TCTACAAGCGTCTGATTGTCGAGTATGAGAAAATGTTTGCCAAGGATTCG
AGAATGGTTGAGTACATTGTGAATCATTGCCGGCAAAAGATACGATTGAT
GGCGACAGCTTTTGCCTTGCTACCGGATTCGGTGTTTTACAGATGGCGCG
AGATAACGGGTCAAAATATATACGAATACTATGGAATGATGGAAACGGGA
TTGGTTTTGGGTCATCCGTTAAATAAACGACAACGTGACTCTCCACATAA
TGGTCCAACAGCGGTTGCTATGGCCAATAATACCGCCCCCAACGATTATC
GACCGGGTACGTTGGGTTCGCCGTTGAAGGGAGTCACGGCCCGATTGATC
AGTAATAAGGGTGACGAGCTAATAACCTGCAAAAACGAACTCGGTGGATC
CGTGGATAGTGGCCTAATACCGGTGGAGGATATCGGCGGCGATGCATCCT
TGGCGGGAACCATAATTGGTGAACTTCAAATTGCTGGTTCCAATTTGGTG
TCCAATACATTGGCTAACAACAATCAGGAAATGGAACACAAAGGAACCAC
AAACAATGAGGAGCAGGAGAACAACCAAGATGGTTTCTTTAAAACCGGAG
ACATTTGCGCCTATCGTAACGGAAACTTTTATTTTTTAAGTAAAAGCAGC
GATATCTTCACCGTCGGCGGTTATAAGGTATACGGATCGGAAATCAAAAA
GGTATTGATCTCACATCCGAATATCAACGATGTGGCTGTCTTAGGTATTC
CCAATAAAATGTGGGGCCATCGTCTTGGTGTCATATGCATTGTATCCCCG
GATGCGGATATTGATTTGGATGCGATCAAGACATACTGCTATCGCCACCT
ACCAGCCCACAAATGCCCTACCGTTTTCAAGACCCTCGTTTCCAAGTAGA
AGCTTTCTAGACCAT
BS28166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18155-RB | 1833 | CG18155-PB | 1..1833 | 17..1849 | 9165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18155-RB | 2047 | CG18155-RB | 115..1948 | 17..1850 | 9170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:34:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7329590..7331156 | 284..1850 | 7835 | 100 | Plus |
| X | 23542271 | X | 7329316..7329508 | 93..285 | 965 | 100 | Plus |
| X | 23542271 | X | 7329160..7329238 | 17..95 | 395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:34:23 has no hits.
BS28166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-11 12:37:23 Download gff for
BS28166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 1..1833 | 17..1849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:01 Download gff for
BS28166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 115..1947 | 17..1849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:53 Download gff for
BS28166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18155-RB | 115..1947 | 17..1849 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:53 Download gff for
BS28166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7329160..7329237 | 17..94 | 100 | -> | Plus |
| X | 7329318..7329507 | 95..284 | 100 | -> | Plus |
| X | 7329591..7331155 | 285..1849 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:01 Download gff for
BS28166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7223193..7223270 | 17..94 | 100 | -> | Plus |
| arm_X | 7223351..7223540 | 95..284 | 100 | -> | Plus |
| arm_X | 7223624..7225188 | 285..1849 | 100 | | Plus |
BS28166.pep Sequence
Translation from 16 to 1848
> BS28166.pep
MLLLRRCHKLKLRPLARLCSAELIHKDGFIEKLRHSFDEEERSNVVVPTF
KKAMLYPDEIAVKDINGEYTYFQLYMAAKRLGIQISNICGGAALSNVTYL
CSNNALWIAIQWSCWISGQVAVPLESGQAIDQLQRQASNCKTKLLIATKE
FESLAQELSQGVKSATIILDHSFLPTAESVSSTSMYAKQLVAIQGVIVTE
NTFPNDFYSKAPAMLIYTPNAVNSPKPVLLTHRNIEAQMRCLIGTWHLGP
TDCMLPILSMNRMHAALAAVLSVGGNVVLQQKFDGHNAWSALLGINSPSK
QRVTLFLAMPIVYKRLIVEYEKMFAKDSRMVEYIVNHCRQKIRLMATAFA
LLPDSVFYRWREITGQNIYEYYGMMETGLVLGHPLNKRQRDSPHNGPTAV
AMANNTAPNDYRPGTLGSPLKGVTARLISNKGDELITCKNELGGSVDSGL
IPVEDIGGDASLAGTIIGELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQ
ENNQDGFFKTGDICAYRNGNFYFLSKSSDIFTVGGYKVYGSEIKKVLISH
PNINDVAVLGIPNKMWGHRLGVICIVSPDADIDLDAIKTYCYRHLPAHKC
PTVFKTLVSK*
BS28166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18155-PB | 610 | CG18155-PB | 1..610 | 1..610 | 3184 | 100 | Plus |
