BS28167.complete Sequence
398 bp assembled on 2012-03-05
GenBank Submission: KX804999
> BS28167.complete
GAAGTTATCAGTCGACATGGCCACGAACCAGCACGACCTCGAGCGGATTC
GCCAGCAGATCGTGTTGGCCAACATTCAGGAGCTGATAAAGAAGATGACA
CGTCGCTGCTTCGACGTATGTATCGCTATGCCGGAAATGGAGTTGCGCTC
CACGGAGCGCGACTGCCTGGCCAACTGTATGGATCGATTCATGGACTCGG
TTCAGGTGGTGTCGAGCCAGTACTTCCGTCGCCGGCGTCGCCATCAGCAA
ATTCGTTTGTCCCGTTCGACCGCCTCCTCCGCATCACCACCAGCATCCGC
ATCCGCATCCATGCCCAAATCCGCAGCAGCAAATGAATCTGAATCCGCAT
CTAGGGCCTCCAATGACGAAAAGGTCAAATAAAAGCTTTCTAGACCAT
BS28167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:01:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42302-RA | 366 | CG42302-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42302-RA | 759 | CG42302-RA | 76..441 | 17..382 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18725232..18725597 | 382..17 | 1830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:01:01 has no hits.
BS28167.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:40 Download gff for
BS28167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42302-RA | 1..364 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:55 Download gff for
BS28167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42302-RA | 1..364 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:02:22 Download gff for
BS28167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42302-RA | 76..439 | 17..380 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:02:22 Download gff for
BS28167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18725234..18725597 | 17..380 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:55 Download gff for
BS28167.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18619267..18619630 | 17..380 | 100 | | Minus |
BS28167.pep Sequence
Translation from 16 to 381
> BS28167.pep
MATNQHDLERIRQQIVLANIQELIKKMTRRCFDVCIAMPEMELRSTERDC
LANCMDRFMDSVQVVSSQYFRRRRRHQQIRLSRSTASSASPPASASASMP
KSAAANESESASRASNDEKVK*
BS28167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42302-PA | 121 | CG42302-PA | 1..121 | 1..121 | 602 | 100 | Plus |
Tim13-PA | 92 | CG11611-PA | 12..81 | 8..77 | 185 | 48.6 | Plus |
CG34132-PA | 84 | CG34132-PA | 12..81 | 8..77 | 175 | 44.3 | Plus |