Clone BS28177 Report

Search the DGRC for BS28177

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:281
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG15047-RA
Protein status:BS28177.pep: full length peptide match
Sequenced Size:557

Clone Sequence Records

BS28177.complete Sequence

557 bp assembled on 2012-03-05

GenBank Submission: KX805790

> BS28177.complete
GAAGTTATCAGTCGACATGTCGCAAGTTGAGCAATTGCATCTGAAATCTC
CGCCAGAAACGGCTGCAGCAGGAGCAGGATCTCCTCAAGCAGCCGCTTCG
GTGGCCGTGGCAGCCGATGCCAACGAAACGGAGCTCATGGTGAAGGTGGT
CATGGACATGGGCTATCCGGAGGGCGAGGCTCGCTTGGCGCTGGCCCAGA
GTAACAACAACGTGCAGCGGGCGGTGCAGATCTTGGTGGAGGGAATGGAT
GACGGCGAGACGCGCAAAAGGCGTGGCAATCGCAAGCGATTAAGGCAACT
GCGCAGCTCCCTCATGGGGAATCCACTTGCCACGGATGAAGCCATCATCG
AGATGATGCGCGATCAGAGGATCGCACAGACGCTCGCCGAGTTGGTGAAC
GGCAGCAGTGTGCAGGCCATGGAACTGCTACTGTCCGAGGAAGTGGATGA
GTCCGAGAACGAGCAGCCGGAGGAGCAGGAGCTTGAAACCAGCCAGGAGC
AGTCATCCTCATCTGCCGATGACTCTTCGCCTAGCAACTGAAAGCTTTCT
AGACCAT

BS28177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15047-RA 525 CG15047-PA 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15047-RA 911 CG15047-RA 30..557 17..544 2640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18528712..18529239 17..544 2640 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:03:32 has no hits.

BS28177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:43 Download gff for BS28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 24..547 17..540 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:12 Download gff for BS28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 30..553 17..540 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:18 Download gff for BS28177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 30..553 17..540 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:18 Download gff for BS28177.complete
Subject Subject Range Query Range Percent Splice Strand
X 18528712..18529235 17..540 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:12 Download gff for BS28177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18422745..18423268 17..540 100   Plus

BS28177.pep Sequence

Translation from 16 to 540

> BS28177.pep
MSQVEQLHLKSPPETAAAGAGSPQAAASVAVAADANETELMVKVVMDMGY
PEGEARLALAQSNNNVQRAVQILVEGMDDGETRKRRGNRKRLRQLRSSLM
GNPLATDEAIIEMMRDQRIAQTLAELVNGSSVQAMELLLSEEVDESENEQ
PEEQELETSQEQSSSSADDSSPSN*

BS28177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG15047-PA 174 CG15047-PA 1..174 1..174 844 100 Plus