BS28179.complete Sequence
824 bp assembled on 2012-03-05
GenBank Submission: KX804751
> BS28179.complete
GAAGTTATCAGTCGACATGGCAATTAAGTTGGTAGCCCTTTTGACCATCG
GACTGGCAATCTTTGCCGCGTGCGAAGCCCGCCATGTGAGCGGACACCAT
CGCAGGCAGCATTTTGAGCAGCGTGCCCTCATAGCGAAGCCCCACAGTGG
TCCCCAGGGACGAGTCTTCCCCGGTGCCGTGGCCATTAAGAAGCTGGTTC
TGCTTAAGTTCAAGAAGATCGTGCCCATCTCTCTGATCCTGCTGAAGTCA
AGCAACGAGAACGAGGCCGAGCTGGTGCCCGTCTATCCCACCGATCAGAT
TCCCGAGAACGTTCAGTTCATCCCGACACCCAATGGAATTTCCGGTCACA
AGGATGTCCAGGCCATCGCCATTCCTGCCGAGCTGCACGACCAGCTGCAG
ATCAACGGTCTGTCCAACCTGGAGAACATCGAGGCTCTGCTGCAGAGCAG
CTCGATCTCGGCTGCCGACAATGAAGGCGAGGCCCCCGTGGGCAACAGCA
TTGCCGTAGCCCAGCCCGAGGATGTGGTACTGGAGCAGCCAGAGAACGAT
GAGGATCAGCTGTTAGACGGAGCCGCTCCAGTCGCCGCTCCTGTAGCCGT
CGCTCCCGCCGCCCTGCGCCGCCTATCCGCCGACGAGCTGCTCCGCTCCG
GCGTGCGCAACTCTGCCCAGCAGCAGCAGACCAGCGTGGAGGAGATACCC
CTGCTTCTGTACTCCGCCAACGAGGGCTCCTCCTCCGCCGGAAACTCGGG
ACGTCGCTTTGTGGCCGCCGCTCCGGCACAGCGCCGTCGCCAGCAGTTCT
ACAACTAGAAGCTTTCTAGACCAT
BS28179.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14424-RA | 792 | CG14424-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14424-RA | 1046 | CG14424-RA | 90..881 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2926049..2926781 | 808..76 | 3665 | 100 | Minus |
| X | 23542271 | X | 2927109..2927169 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:21:40 has no hits.
BS28179.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 17:39:44 Download gff for
BS28179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:18 Download gff for
BS28179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 90..881 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:09:29 Download gff for
BS28179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 90..881 | 17..808 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:09:29 Download gff for
BS28179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2927109..2927169 | 17..77 | 100 | | Minus |
| X | 2926049..2926779 | 78..808 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:18 Download gff for
BS28179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2820082..2820812 | 78..808 | 100 | <- | Minus |
| arm_X | 2821142..2821202 | 17..77 | 100 | | Minus |
BS28179.pep Sequence
Translation from 16 to 807
> BS28179.pep
MAIKLVALLTIGLAIFAACEARHVSGHHRRQHFEQRALIAKPHSGPQGRV
FPGAVAIKKLVLLKFKKIVPISLILLKSSNENEAELVPVYPTDQIPENVQ
FIPTPNGISGHKDVQAIAIPAELHDQLQINGLSNLENIEALLQSSSISAA
DNEGEAPVGNSIAVAQPEDVVLEQPENDEDQLLDGAAPVAAPVAVAPAAL
RRLSADELLRSGVRNSAQQQQTSVEEIPLLLYSANEGSSSAGNSGRRFVA
AAPAQRRRQQFYN*
BS28179.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14424-PA | 263 | CG14424-PA | 1..263 | 1..263 | 1304 | 100 | Plus |
