BS28181.complete Sequence
695 bp assembled on 2012-03-05
GenBank Submission: KX800460
> BS28181.complete
GAAGTTATCAGTCGACATGAAGTCGTTCGGGAACTTGACCTTTGGCCTAC
TCGTCATCCTTATAGCAAGCTTTACTGTCGGCCTAGAGGCTCGTCGCCTG
GCTTTGCGTCCATTGACAGGAAGGGAACTGAGAAGAGCTCTTAGGGAATC
CGGATTCGATGAGGATTCTGCAGCTGGAAGATCAGTGGCGTCGGCGCTGT
CCGGACTCAGTGGATTCGCCCTGGGCATCACAAAGGGCATTGGTGGCTCA
CTGCTGTTCGATGTGGTCACCTCGAATGTGACCATTGATTACATTACCAG
TCTGCTGAACTCCACTGCCTCATCGTCGACTTCAAGCAGCAGTGGAACTG
CACAGGAGATCTGTTTCAACAGTCGCAGTGCCGACGGTGAGGTGATTAAC
GGCAGGAGTAATGGCTTCAATGACATGGATGATGGAGCAGATCTCGACGG
CGAGTGGAGACAGACTACCAGTGGCACGGGCACGGGCTCTGTTACTGGCA
CTGGCACTGAGACAGGAACTACCACCTCCTCGTCTTCCAACGGCCTCACC
TGCATTGTCCTGAGCAAGGAGGGTTCCCGTCGCAGGCGCCAGTTGCGAAT
CCAACCAGGAACGTTGAGATCTGTTTATCCTAAAAGCCATCGGCAGACCC
TGAAAAAGTACCGCCGGCATAGGGTTTAGAAGCTTTCTAGACCAT
BS28181.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13438-RA | 663 | CG13438-PA | 1..663 | 17..679 | 3315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13438-RA | 834 | CG13438-RA | 42..704 | 17..679 | 3315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20693019..20693609 | 89..679 | 2955 | 100 | Plus |
2R | 25286936 | 2R | 20692870..20692942 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:04:32 has no hits.
BS28181.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:43 Download gff for
BS28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13438-RA | 1..663 | 17..679 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for
BS28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13438-RA | 42..704 | 17..679 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:40 Download gff for
BS28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13438-RA | 42..704 | 17..679 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:40 Download gff for
BS28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20692870..20692942 | 17..89 | 100 | -> | Plus |
2R | 20693020..20693609 | 90..679 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for
BS28181.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16580375..16580447 | 17..89 | 100 | -> | Plus |
arm_2R | 16580525..16581114 | 90..679 | 100 | | Plus |
BS28181.pep Sequence
Translation from 16 to 678
> BS28181.pep
MKSFGNLTFGLLVILIASFTVGLEARRLALRPLTGRELRRALRESGFDED
SAAGRSVASALSGLSGFALGITKGIGGSLLFDVVTSNVTIDYITSLLNST
ASSSTSSSSGTAQEICFNSRSADGEVINGRSNGFNDMDDGADLDGEWRQT
TSGTGTGSVTGTGTETGTTTSSSSNGLTCIVLSKEGSRRRRQLRIQPGTL
RSVYPKSHRQTLKKYRRHRV*
BS28181.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13438-PA | 220 | CG13438-PA | 1..220 | 1..220 | 1096 | 100 | Plus |