BS28182.complete Sequence
578 bp assembled on 2012-03-05
GenBank Submission: KX805304
> BS28182.complete
GAAGTTATCAGTCGACATGGCGCCCAATTTGACTTGTGTATGGATTACTC
TGCTGCAACTCATGAGCTTGGCTCTGGCCGATGTCTCACACCTGGATTAC
TCGATAGCACCCAGCACCCAGCTGGGTTACTATCACTATCCCGCTCCCAA
CAGGCCAGCCGTGCAGCGGAGCCAGAGGAACCAGTACCAACAGAACCAGC
AGTATCCCCAAGTGGCACGACAGTTTGCCGAGCCCGCCTTGGAGCATGCC
GCCTTCACCCAGGCTCTGACCAGCCAGGGTTACGTATTTGGAGCACCGTC
GTCTGCCCTCCAGGTGGCTCCCCCGGCACCACAGCCCCAGCAGGTGGCCA
GAGTATCATCTGCTGCGGGATCGGCCACAGGTCGTTCCATATCCTCCGCT
TCCGTGGATGCCAACTCGCTGAATCTCAAGCTGCCAGTGCCCTTTGGCAT
TGCTCCACTGAATGTGGCGCAACTTCCGCTGCAGGCTGGGGCACCATATG
CCAGTGTGCCCAGAACCACGGGGCTAACCTCCTATGGAACACCGCAGATC
CAGAGGCGCTAGAAGCTTTCTAGACCAT
BS28182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-RB | 546 | CG13046-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-RB | 781 | CG13046-RB | 101..646 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:01:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16287715..16288248 | 562..29 | 2670 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 05:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6892 | 164..211 | 105 | 68.8 | Plus |
BS28182.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:41 Download gff for
BS28182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 1..546 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:59 Download gff for
BS28182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 101..646 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:02:37 Download gff for
BS28182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13046-RB | 101..646 | 17..562 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:02:37 Download gff for
BS28182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16287715..16288248 | 29..562 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:59 Download gff for
BS28182.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16280815..16281348 | 29..562 | 100 | <- | Minus |
BS28182.pep Sequence
Translation from 16 to 561
> BS28182.pep
MAPNLTCVWITLLQLMSLALADVSHLDYSIAPSTQLGYYHYPAPNRPAVQ
RSQRNQYQQNQQYPQVARQFAEPALEHAAFTQALTSQGYVFGAPSSALQV
APPAPQPQQVARVSSAAGSATGRSISSASVDANSLNLKLPVPFGIAPLNV
AQLPLQAGAPYASVPRTTGLTSYGTPQIQRR*
BS28182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13046-PB | 181 | CG13046-PB | 1..181 | 1..181 | 923 | 100 | Plus |