BS28185.complete Sequence
812 bp assembled on 2012-03-05
GenBank Submission: KX800328
> BS28185.complete
GAAGTTATCAGTCGACATGTCGAAAAAGTATCCGAACCCGGTGACCAAGC
ACTTCGTCTATAGCGAAAGGACGCGAAAAAGTACCTGCAAAAGGTGCCAC
TTCGATATGGCAGGTCGCCACTCCGAGAATCTGATGCGGCATTTGAAACG
TAAGCATGAGGATGCCTACAAAAGTGTTCTGGACGAGAAGCGAGAAATCC
GTGCGGCACTTGCCCAGCAGCAGGCCAACAAAGATGCAGTCAATCCGACG
AAGAAAGTCTTGGCCTCTAAGTATCCTCTATATCCAACGACACGAAAGCA
GTCTTTCATTACCGAGGACGACGACTCCCAGCACAGTGGCATGGAAACCA
TGGTGACGTTGAATGGTGAAGAGACCGGGGACGTAGATAACAAGAACAAC
GCTACAGTCAGTCAGTTCGAGGGCGTTTTTATTGGAAAATCGGAGATACC
TGACGAGGAGTATCAGTGGAAAAACTCTGCAAATATGGAACTGAAGGCCG
TCGATGTTTCTGTGGCCCAGACTACTAACGAATCCAGCGTCTGTGTGGCT
CCCACTTCCACCACTGCTCGTGCCAAGTCTCCAGCTCGAGCCGCATCTTC
TGCGGCTGCTTTAGACCAATCTCCAAGCGACGAGGACTACTTCCTCCGCT
ATCTGGGCAGCAAATTAGGCAAATACTCTGCCCGCACAAGGAACACAGTC
CAGTTTCACATTAATCGCATACTGTACAAGGCGGACATGGGTCACTTTGA
GGAAACAGATTCCAGGATGGGCGATGACGACTACGCCTCCCCGTAGAAGC
TTTCTAGACCAT
BS28185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14050-RB | 780 | CG14050-PB | 1..780 | 17..796 | 3900 | 100 | Plus |
| CG14050-RA | 780 | CG14050-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14050-RB | 1385 | CG14050-RB | 528..1307 | 17..796 | 3900 | 100 | Plus |
| CG14050-RA | 952 | CG14050-RA | 95..874 | 17..796 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2324826..2325307 | 796..315 | 2410 | 100 | Minus |
| X | 23542271 | X | 2325390..2325690 | 317..17 | 1505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:18:25 has no hits.
BS28185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 17:39:43 Download gff for
BS28185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 1..780 | 17..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:13 Download gff for
BS28185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 95..874 | 17..796 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:08:11 Download gff for
BS28185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 95..874 | 17..796 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:08:11 Download gff for
BS28185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2325391..2325690 | 17..316 | 100 | | Minus |
| X | 2324826..2325305 | 317..796 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:13 Download gff for
BS28185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2218859..2219338 | 317..796 | 100 | <- | Minus |
| arm_X | 2219424..2219723 | 17..316 | 100 | | Minus |
BS28185.pep Sequence
Translation from 16 to 795
> BS28185.pep
MSKKYPNPVTKHFVYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDA
YKSVLDEKREIRAALAQQQANKDAVNPTKKVLASKYPLYPTTRKQSFITE
DDDSQHSGMETMVTLNGEETGDVDNKNNATVSQFEGVFIGKSEIPDEEYQ
WKNSANMELKAVDVSVAQTTNESSVCVAPTSTTARAKSPARAASSAAALD
QSPSDEDYFLRYLGSKLGKYSARTRNTVQFHINRILYKADMGHFEETDSR
MGDDDYASP*
BS28185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14050-PB | 259 | CG14050-PB | 1..259 | 1..259 | 1346 | 100 | Plus |
| CG14050-PA | 259 | CG14050-PA | 1..259 | 1..259 | 1346 | 100 | Plus |
