BS28186.complete Sequence
857 bp assembled on 2012-03-05
GenBank Submission: KX800579
> BS28186.complete
GAAGTTATCAGTCGACATGATCAAGTACGTGTGGCATGTGGCTGCTCTGA
TGATCGTCTTCTGTTGGCTCTCCAGTGCCCGCAGTGCCAGCTACCAGCAT
CAGAACCCGAACAGTCTGAGCTCGGCCCCCAGGCCCCAAGTCCAAAACAG
TAACCCCGGAATGGGGTCTACGGGCTTGTGGAAGGACATGTCAATGGTCT
ACCGCATATACCAGCAGTGCTCGGGCGATAACATGTCCGTTTGCCTAAAG
GTCAAACTGCTAACCGGCTTGGAGAAGGCCTTTCGATCGGCAAAGTCTCT
CTCGCTCATGGAGGGCATTCAGTTCGTCAGTTCTGGTGGAGAAAGTGAGG
AGACCAAAAGAGCGCCCATTAGCGAAAAGGATATTGAAGCCGTCTTGCCG
AGAAGTGTGGACGCCAAGGAGCAGGTCCTAAACAACATGATCCTGAAGCG
GGTGGGCAACTTCCTACAGGATCACACGCTACAGGTGAAATTCGATAACG
AGGCAAATTCGGTGGAGGGTCGCAAGAAAAAGGAGAAGAAGGGCAACGGC
GCAATGATCATGATTCCCCTTCTGCTTGGCGGCACCATTGTGCCCCTGGC
CTACGGAGCCTTGGCCATGTTGGCGGGAAAGGCGCTGATTGTGTCCAAGC
TGGCCCTGGTGCTGGCCTCGATCATCGGAATCAAGAAGCTGCTGAGTGGA
GGCGGCGGCGGGAAGGAGTCCTCCCACGAGGTGGTCGTCTCCTCAGGAGG
ACATTCCGGCTGGGGTCGGGAGCTGGACACCGCCTACAGCGGCTGGAAGC
CGGCGGCCAAGGAGTCGGCGGGCAGCGCCAAGAGCCTGTGAAAGCTTTCT
AGACCAT
BS28186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi8-RA | 825 | CG15591-PA | 1..825 | 17..841 | 4125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi8-RA | 1135 | CG15591-RA | 100..925 | 16..841 | 4130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6255274..6255746 | 16..488 | 2365 | 100 | Plus |
| 3R | 32079331 | 3R | 6256033..6256392 | 482..841 | 1800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:04:57 has no hits.
BS28186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:44 Download gff for
BS28186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 1..824 | 17..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:24 Download gff for
BS28186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 101..924 | 17..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:03:49 Download gff for
BS28186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 101..924 | 17..840 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:03:49 Download gff for
BS28186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6255275..6255742 | 17..484 | 100 | -> | Plus |
| 3R | 6256036..6256391 | 485..840 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:24 Download gff for
BS28186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2080997..2081464 | 17..484 | 100 | -> | Plus |
| arm_3R | 2081758..2082113 | 485..840 | 100 | | Plus |
BS28186.pep Sequence
Translation from 16 to 840
> BS28186.pep
MIKYVWHVAALMIVFCWLSSARSASYQHQNPNSLSSAPRPQVQNSNPGMG
STGLWKDMSMVYRIYQQCSGDNMSVCLKVKLLTGLEKAFRSAKSLSLMEG
IQFVSSGGESEETKRAPISEKDIEAVLPRSVDAKEQVLNNMILKRVGNFL
QDHTLQVKFDNEANSVEGRKKKEKKGNGAMIMIPLLLGGTIVPLAYGALA
MLAGKALIVSKLALVLASIIGIKKLLSGGGGGKESSHEVVVSSGGHSGWG
RELDTAYSGWKPAAKESAGSAKSL*
BS28186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi8-PA | 274 | CG15591-PA | 1..274 | 1..274 | 1388 | 100 | Plus |
| Osi12-PA | 295 | CG1154-PA | 50..247 | 63..269 | 268 | 34 | Plus |
| Osi11-PA | 302 | CG15596-PA | 26..288 | 44..262 | 228 | 28.1 | Plus |
| Osi7-PA | 288 | CG1153-PA | 43..285 | 64..262 | 220 | 26.1 | Plus |
| Osi14-PA | 268 | CG1155-PA | 48..250 | 71..274 | 215 | 29.7 | Plus |
