BS28188.complete Sequence
746 bp assembled on 2012-03-05
GenBank Submission: KX803347
> BS28188.complete
GAAGTTATCAGTCGACATGTATCTACGCGCGCGTTTGGCTCTGCTGAGCC
TTCTCTTCCTGATGGTCTCCGGTCAGAGGAGTAAGTCCCGGAGTGAACGT
CCTCAAGGCAGGACCTTGGGATTATTGACTCCCCTTTTACTGGGAGGTGG
TGGACCGCTCTTCGATGTTCCCCTGCCCGCAGGACCACCCATCAGACCAG
GTGGTGGTTCATCCTCCGCAGCCGGAGGAGGCACCCAATCGGACTCATAC
TACGGCGGCAGTTATCCTAGCTACGGATACAGGCCCAACTATGGATACGG
ATATCCCAACTACGGTTATAACTATGGATACCCGGTCTTCGGCTACGGCT
ATGGGCAGAACTACTACAGACCCAGCTACTACAATTATGGTGGATACCAG
AGACCGCAGCCCTATTATGGTTACCGGCCCACTTATAGCTCCAGTGGAAC
TGCCGGATCAGGCGGTTATCCCTCATACAGCAGTTCAGCTGTCATCTCAA
GCTCTCCAACAAATTCGGCCGTTGGTTCGGCATCAGGAGCAGGAGCAGTA
TCCGGAGGTGGAACCCCACAGCTATCCACCGCTCAGCAAGCCCAGTTAGC
CGGTCTTTTGGGTCAGGCCCTTGGCAGCAGTCTACGCCCTCTTCTCGCCA
ATGGGGGCGGGGCAGCTGGAGCGACAGGAGCGGGAGCAAATCCACAAGCG
CTGAGCGGTCTACTCAGTCTGCTTGGCTAGAAGCTTTCTAGACCAT
BS28188.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:17:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13226-RA | 714 | CG13226-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13226-RA | 953 | CG13226-RA | 40..758 | 13..731 | 3580 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11244286..11245004 | 13..731 | 3580 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:17:04 has no hits.
BS28188.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 17:15:23 Download gff for
BS28188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13226-RA | 1..714 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:04 Download gff for
BS28188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13226-RA | 37..750 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:07:39 Download gff for
BS28188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13226-RA | 44..757 | 17..730 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:07:39 Download gff for
BS28188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11244290..11245003 | 17..730 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:04 Download gff for
BS28188.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7131795..7132508 | 17..730 | 100 | | Plus |
BS28188.pep Sequence
Translation from 16 to 729
> BS28188.pep
MYLRARLALLSLLFLMVSGQRSKSRSERPQGRTLGLLTPLLLGGGGPLFD
VPLPAGPPIRPGGGSSSAAGGGTQSDSYYGGSYPSYGYRPNYGYGYPNYG
YNYGYPVFGYGYGQNYYRPSYYNYGGYQRPQPYYGYRPTYSSSGTAGSGG
YPSYSSSAVISSSPTNSAVGSASGAGAVSGGGTPQLSTAQQAQLAGLLGQ
ALGSSLRPLLANGGGAAGATGAGANPQALSGLLSLLG*
BS28188.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13226-PA | 237 | CG13226-PA | 1..237 | 1..237 | 1251 | 100 | Plus |
CG13285-PA | 198 | CG13285-PA | 58..171 | 93..203 | 156 | 37.7 | Plus |
CG13285-PB | 154 | CG13285-PB | 58..144 | 93..181 | 152 | 42.9 | Plus |
Edg91-PB | 151 | CG7539-PB | 1..142 | 9..181 | 149 | 35.3 | Plus |
Edg91-PA | 159 | CG7539-PA | 9..150 | 9..181 | 149 | 35.3 | Plus |