BS28206.complete Sequence
371 bp assembled on 2012-03-05
GenBank Submission: KX802064
> BS28206.complete
GAAGTTATCAGTCGACATGAGATCGTGTACTTTACTTGTTTTCATAGTGA
GCACGCTGTTGTTTGCCGTGACAAATGCGCAGCAGAATTATGATGGAAGA
AATGGTCCCCATGAGTTCGGCACACCTGGAAACGGCATTTACATACGGGG
TCAGAACGAAGGACCCTACACAGTGCCCGAAATGGGAGGAACGTTCCAAA
ACTCACCCTCAAGTGGGCAGCATTCCTACACCGATGAGCACGGAAATACT
TACACCCATTCCTCAACGGCAACTGTCACAAGTTTGGCCTATTCAACCTT
CGGTTTCAGCATGGGCGGCGTTCTCATTTTTCTAATTAGTTTAATAACCA
TTTAAAAGCTTTCTAGACCAT
BS28206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30285-RA | 339 | CG30285-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30285-RA | 575 | CG30285-RA | 35..374 | 16..355 | 1700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21688104..21688391 | 355..68 | 1440 | 100 | Minus |
| 2R | 25286936 | 2R | 21688459..21688511 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:07:57 has no hits.
BS28206.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:45 Download gff for
BS28206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 12..348 | 17..353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:38 Download gff for
BS28206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 36..372 | 17..353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:04:44 Download gff for
BS28206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 36..372 | 17..353 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:04:44 Download gff for
BS28206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21688106..21688390 | 69..353 | 100 | <- | Minus |
| 2R | 21688459..21688510 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:38 Download gff for
BS28206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17575964..17576015 | 17..68 | 100 | | Minus |
| arm_2R | 17575611..17575895 | 69..353 | 100 | <- | Minus |
BS28206.pep Sequence
Translation from 16 to 354
> BS28206.pep
MRSCTLLVFIVSTLLFAVTNAQQNYDGRNGPHEFGTPGNGIYIRGQNEGP
YTVPEMGGTFQNSPSSGQHSYTDEHGNTYTHSSTATVTSLAYSTFGFSMG
GVLIFLISLITI*
BS28206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30285-PA | 112 | CG30285-PA | 1..112 | 1..112 | 591 | 100 | Plus |
| CG33470-PC | 257 | CG33470-PC | 1..85 | 1..85 | 254 | 51.8 | Plus |
| CG33470-PA | 257 | CG33470-PA | 1..85 | 1..85 | 254 | 51.8 | Plus |
| IM10-PC | 257 | CG18279-PC | 1..85 | 1..85 | 254 | 51.8 | Plus |
| IM10-PA | 257 | CG18279-PA | 1..85 | 1..85 | 254 | 51.8 | Plus |
