BS28313.complete Sequence
1016 bp assembled on 2012-03-08
GenBank Submission: KX800905
> BS28313.complete
GAAGTTATCAGTCGACATGGCCAAAACCCGCATCAAGATGACGCCGCTGC
GCAAGTCCTCGTCCTCCAAGGGCATTGTGCTACCCATTAATGCCGCTGGA
GGGTCGGTCATTGCAGGCGCCTTAGCAGGAGGAGGAGGTGCAGGAACTGG
GAGCGGTGCTGTCAAGTCGGCGGTGGCCAGCAGCACCACCATTGAACTTG
TTGAGAGCCCCAATAGACATCAGGCCAAGAAGCCCAACACCGGCATTATG
CCCATGCCACAGCGTTCCCACTCCATTAGCTCCTCGGCCTCCAGCGATGT
GCTGTCCATAAACTCCGACTACGAAGCCTCGTTACCACTATCAGCCTTAG
AGGATTCCCAGAATGGACTGAACCGCTTGGAGAACGGTCAAGCCAAGAAG
AGGAAACTGTACGTGATCACCGAAAAATCGGATGAGACGAAAGGTCAGAC
TCTGGAGACAAATGGACAGCCCAAGAAGCGTAAGATGTTCGTGGTTGTGG
AGCAGGATAAAGATGTGGCGGGCAAGAAACTAATGATTATGGCCGACAAG
CCGCAGACCAATCTTACCCAGCATTTGGAGAAACTACTGCCCGAGCTATT
GAATCGCATACAGGACAAAGAACAGAAGCAGATCAAACCAGCTCCAGTGG
TGACTAAAGCCAAGCCGGTGGTTAACAATCCCAGACCACATATAACATTG
CCGCCCAAAAAGAATCCAACTAATTTTGCAAAGATCACGTCCACACCAAG
CTCAGTGCCTTCATCCATTCAGATGCCACTGCCAATTCAGAATACCAAGA
TCCTAAAGTCCGAGAATTCGGAACTGACAATGAATTCGGATGAGATCGAG
ACGAACATAAATCTATCGCCCGACTTCCGCTTCCTAATGAAAATCCTACC
CAAATTGGAACAGCTGCCCGAGCCCCACAAGCAGAACGTGAAGCGTTCCA
TCCAGATCTTCGTGGAGAAGAGCTACAGTATTTACGGCAACAAGGATTAG
AAGCTTTCTAGACCAT
BS28313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bip1-RB | 984 | CG7574-PB | 1..984 | 17..1000 | 4920 | 100 | Plus |
| bip1-RA | 1260 | CG7574-PA | 277..1260 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:45:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bip1-RB | 1472 | CG7574-RB | 177..1160 | 17..1000 | 4920 | 100 | Plus |
| bip1-RA | 1825 | CG7574-RA | 530..1513 | 17..1000 | 4920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:45:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8054645..8055441 | 1000..204 | 3985 | 100 | Minus |
| 3L | 28110227 | 3L | 8055876..8056064 | 205..17 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:45:43 has no hits.
BS28313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:23 Download gff for
BS28313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bip1-RB | 174..1157 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:19 Download gff for
BS28313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bip1-RA | 530..1513 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:45 Download gff for
BS28313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bip1-RA | 530..1513 | 17..1000 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:45 Download gff for
BS28313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8054645..8055439 | 206..1000 | 100 | <- | Minus |
| 3L | 8055876..8056064 | 17..205 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:19 Download gff for
BS28313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8047745..8048539 | 206..1000 | 100 | <- | Minus |
| arm_3L | 8048976..8049164 | 17..205 | 100 | | Minus |
BS28313.pep Sequence
Translation from 16 to 999
> BS28313.pep
MAKTRIKMTPLRKSSSSKGIVLPINAAGGSVIAGALAGGGGAGTGSGAVK
SAVASSTTIELVESPNRHQAKKPNTGIMPMPQRSHSISSSASSDVLSINS
DYEASLPLSALEDSQNGLNRLENGQAKKRKLYVITEKSDETKGQTLETNG
QPKKRKMFVVVEQDKDVAGKKLMIMADKPQTNLTQHLEKLLPELLNRIQD
KEQKQIKPAPVVTKAKPVVNNPRPHITLPPKKNPTNFAKITSTPSSVPSS
IQMPLPIQNTKILKSENSELTMNSDEIETNINLSPDFRFLMKILPKLEQL
PEPHKQNVKRSIQIFVEKSYSIYGNKD*
BS28313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bip1-PB | 327 | CG7574-PB | 1..327 | 1..327 | 1641 | 100 | Plus |
| bip1-PA | 419 | CG7574-PA | 93..419 | 1..327 | 1641 | 100 | Plus |
