BS28327.complete Sequence
491 bp assembled on 2012-03-08
GenBank Submission: KX802414
> BS28327.complete
GAAGTTATCAGTCGACATGCTAGTCATAAACTCATGCAGAGCTGCCTCCA
GATTGGCGCTACGCAGCCTCAATTTGCGATCGCCGATCGCAACGCGTACT
TTCTCGACGGGATTGGCCCTGAAAACGAAAGATGTTGTTAACATAACCTT
CGTGCGTGCCAATGGGGACAAGATTAAGACGTCCGGAAAAGTGGGTGACT
CCCTGCTGGACGTGGTGGTCAACAACAATGTGGATCTGGATGGTTTCGGG
GCCTGTGAGGGCACGCTGACCTGCTCCACCTGCCACCTGATCTTCAAGAC
CAGCGATTTCGAGAAACTGCCCGACAAACCCGGTGATGAGGAGCTGGACA
TGCTGGATTTGGCGTACGAACTGACGGACACCTCGCGGCTGGGCTGCCAG
ATCACCCTGTCCAAGGATATGGAGGGCCTGGAGGTACATGTGCCCTCCAC
CATCAATGACGCACGTGCCGCGTAGAAGCTTTCTAGACCAT
BS28327.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:50:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-RB | 459 | CG1319-PB | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:50:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-RB | 863 | CG1319-RB | 143..602 | 17..476 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:49:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4292831..4293171 | 136..476 | 1705 | 100 | Plus |
| 3L | 28110227 | 3L | 4292624..4292742 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:49:59 has no hits.
BS28327.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:27 Download gff for
BS28327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 128..586 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:43 Download gff for
BS28327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 143..601 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:19:22 Download gff for
BS28327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1319-RB | 143..601 | 17..475 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:19:22 Download gff for
BS28327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4292831..4293170 | 136..475 | 100 | | Plus |
| 3L | 4292624..4292742 | 17..135 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:43 Download gff for
BS28327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4292624..4292742 | 17..135 | 100 | -> | Plus |
| arm_3L | 4292831..4293170 | 136..475 | 100 | | Plus |
BS28327.pep Sequence
Translation from 16 to 474
> BS28327.pep
MLVINSCRAASRLALRSLNLRSPIATRTFSTGLALKTKDVVNITFVRANG
DKIKTSGKVGDSLLDVVVNNNVDLDGFGACEGTLTCSTCHLIFKTSDFEK
LPDKPGDEELDMLDLAYELTDTSRLGCQITLSKDMEGLEVHVPSTINDAR
AA*
BS28327.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1319-PB | 152 | CG1319-PB | 1..152 | 1..152 | 772 | 100 | Plus |
| Fdxh-PB | 172 | CG4205-PB | 53..156 | 37..143 | 228 | 42.1 | Plus |
| Fdxh-PA | 172 | CG4205-PA | 53..156 | 37..143 | 228 | 42.1 | Plus |
