BS28342.complete Sequence
530 bp assembled on 2012-03-08
GenBank Submission: KX802840
> BS28342.complete
GAAGTTATCAGTCGACATGGCCGATGTGTTGGACATTGACAATGCGGAGG
AGTTCGAGGTGGACGAGGACGGTGACCAGGGCATTGTGCGCCTGAAGGAA
AAGGCGAAGCACCGCAAGGGACGCGGATTTGGAAGCGACAGTAACACCCG
AGAGGCGATCCACAGCTACGAGCGTGTGCGCAACGAGGACGACGATGAGC
TGGAACCTGGTCCACAAAGGTCCGTCGAGGGCTGGATACTGTTTGTCACC
TCTATCCATGAGGAGGCGCAGGAGGACGAGATTCAGGAAAAGTTCTGCGA
TTACGGAGAAATCAAGAACATTCACCTGAACCTCGACCGGCGTACTGGGT
TCTCAAAGGGATACGCTCTCGTCGAGTACGAGACCCACAAGCAGGCGCTC
GCCGCCAAAGAGGCCCTGAACGGTGCCGAAATAATGGGACAGACCATTCA
GGTTGACTGGTGCTTCGTTAAGGGACCGAAGCGCGTTAAAAAGTCCGAAA
AGCGTCGCAGATAAAAGCTTTCTAGACCAT
BS28342.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-RA | 498 | CG8781-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-RA | 691 | CG8781-RA | 98..596 | 17..515 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:48:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9111046..9111483 | 78..515 | 2190 | 100 | Plus |
2R | 25286936 | 2R | 9110896..9110956 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:48:30 has no hits.
BS28342.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:33 Download gff for
BS28342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 96..591 | 17..512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:25 Download gff for
BS28342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 98..593 | 17..512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:21 Download gff for
BS28342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tsu-RA | 98..593 | 17..512 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:21 Download gff for
BS28342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9110896..9110956 | 17..77 | 100 | -> | Plus |
2R | 9111046..9111480 | 78..512 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:25 Download gff for
BS28342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4998401..4998461 | 17..77 | 100 | -> | Plus |
arm_2R | 4998551..4998985 | 78..512 | 100 | | Plus |
BS28342.pep Sequence
Translation from 16 to 513
> BS28342.pep
MADVLDIDNAEEFEVDEDGDQGIVRLKEKAKHRKGRGFGSDSNTREAIHS
YERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIK
NIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF
VKGPKRVKKSEKRRR*
BS28342.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:50:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tsu-PA | 165 | CG8781-PA | 1..165 | 1..165 | 866 | 100 | Plus |