BS28344.complete Sequence
941 bp assembled on 2012-03-08
GenBank Submission: KX805466
> BS28344.complete
GAAGTTATCAGTCGACATGAGTGACAACCCCGCCGCGGAGAACGAAAAGC
GACCGCAGTTCGGAACCCGCCTGCTCACGGATGCTGACGACGTCTTCAAG
CACAATGCTTGGGACCACGTGCAATGGGATGAAGAGCAGGAACTGGCCGC
GAAGGCGGCTGTAGCCAAGAATTCGACCTCAAAGATGGAAGCGGAGCAGA
AGGAGCGATTTCAGACAGACGCCCCCAAGTTTTGGGATTCCTTCTACGGC
ATTCACGACAACCGCTTCTTCAAGGATCGCCACTGGCTGTTTACGGAGTT
CCCCGAACTAGCTCCTCTGGCGGCGGATTCGGCGGTACTGCAACCACGTA
GCATTTTCGAACTGGGCTGTGGAGTAGGAAACACAATTTTACCCCTTCTA
CAGTACAGCTCTGAACCGCAGCTCAAGGTTTTCGGATGTGACTTCTCCGC
CCGGGCCATTGAAATCCTGCGAAGCCAACGGCAGTTCGACGAGAAGCGCT
GCGAGGTGTTTGTCATGGATGCCACGCTGGATCATTGGCAGGTGCCCTTC
GAGGAAAACTCACAGGACATTATTGTGATGATTTTTGTGCTGTCCGCAAT
TGAGCCAAAGAAAATGCAGCGGGTATTGGACAATTGCTATCGCTACCTGC
GTCCCGGTGGCTTGCTCCTCTTCCGCGACTACGGACGATACGACCTGGCA
CAGCTGCGCTTCAAGAGCGGCAAGTGTATGGAGGACAACTTCTACGTGCG
AGGCGACGGCACCATGGTGTACTTCTTCACGGAGGAAGAACTGCGGGGTA
TGATGACTCAAGCGGGGCTGCAGGAGGAGCAGCTCATTGTGGACCGAAGA
CTGCAAGTTAATCGCTGTCGCGGCTTGAAAATGTACCGCGTGTGGATTCA
GACAAAGTTCAGGAAACCGCTTTAAAAGCTTTCTAGACCAT
BS28344.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:49:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-RA | 909 | CG13929-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
| metl-RB | 978 | CG13929-PB | 163..978 | 110..925 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:49:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-RA | 1107 | CG13929-RA | 96..1009 | 13..926 | 4555 | 99.9 | Plus |
| metl-RB | 1240 | CG13929-RB | 326..1142 | 110..926 | 4085 | 100 | Plus |
| metl-RB | 1240 | CG13929-RB | 96..195 | 13..112 | 485 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:49:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1638040..1638855 | 926..111 | 4080 | 100 | Minus |
| 3L | 28110227 | 3L | 1639041..1639140 | 112..13 | 485 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:49:15 has no hits.
BS28344.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:34 Download gff for
BS28344.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 99..1005 | 17..923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:29 Download gff for
BS28344.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 100..1006 | 17..923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:36 Download gff for
BS28344.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 100..1006 | 17..923 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:36 Download gff for
BS28344.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1638043..1638854 | 112..923 | 100 | <- | Minus |
| 3L | 1639042..1639136 | 17..111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:29 Download gff for
BS28344.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1638043..1638854 | 112..923 | 100 | <- | Minus |
| arm_3L | 1639042..1639136 | 17..111 | 100 | | Minus |
BS28344.pep Sequence
Translation from 16 to 924
> BS28344.pep
MSDNPAAENEKRPQFGTRLLTDADDVFKHNAWDHVQWDEEQELAAKAAVA
KNSTSKMEAEQKERFQTDAPKFWDSFYGIHDNRFFKDRHWLFTEFPELAP
LAADSAVLQPRSIFELGCGVGNTILPLLQYSSEPQLKVFGCDFSARAIEI
LRSQRQFDEKRCEVFVMDATLDHWQVPFEENSQDIIVMIFVLSAIEPKKM
QRVLDNCYRYLRPGGLLLFRDYGRYDLAQLRFKSGKCMEDNFYVRGDGTM
VYFFTEEELRGMMTQAGLQEEQLIVDRRLQVNRCRGLKMYRVWIQTKFRK
PL*
BS28344.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-PA | 302 | CG13929-PA | 1..302 | 1..302 | 1606 | 100 | Plus |
| metl-PB | 325 | CG13929-PB | 31..325 | 8..302 | 1495 | 95.6 | Plus |
| CG34195-PA | 283 | CG34195-PA | 27..280 | 51..300 | 480 | 39.7 | Plus |
