BS28348.complete Sequence
425 bp assembled on 2012-03-08
GenBank Submission: KX803086
> BS28348.complete
GAAGTTATCAGTCGACATGATGTACAAGTTATGGTGGAAATTGCTTCTCC
TCCAGGCTTCTGGGTGTCTATCTCTGGAGAGTCGCCCAGATCCACGCATA
GTCGGTGGCTTCCCAGCCGATATCGCCAACATTCCGTACATAGTGTCCAT
CCAACTGTACGGCATCCACCATTGTGGCGGCTCCATAATAAATAACCACA
CCATCCTAACGGCTGGCCATTGTCTGAACGGAGTGCCACATCGCCTGCTG
AAAGTTAAGGTCGGCGGAACGTCGCGCTACCGAAAAGATGGGGAACTGTT
CTCGGTCGCTGACCTGCAAGTCCACGAGAATTTCAATCCCAAGACCATGG
ACTATGACATCGGTATCATCAGGTTGACCAAAAACCTAACACTATCTAGA
AAGGTTTGAAAGCTTTCTAGACCAT
BS28348.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7829-RA | 762 | CG7829-PA | 1..389 | 17..405 | 1945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:41:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7829-RA | 976 | CG7829-RA | 37..425 | 17..405 | 1945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:41:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29817334..29817728 | 411..17 | 1975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:41:48 has no hits.
BS28348.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:30 Download gff for
BS28348.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7829-RB | 37..428 | 17..408 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:08 Download gff for
BS28348.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7829-RA | 37..425 | 17..408 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:56 Download gff for
BS28348.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7829-RA | 37..425 | 17..408 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:56 Download gff for
BS28348.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29817337..29817728 | 17..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:08 Download gff for
BS28348.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25643059..25643450 | 17..408 | 100 | | Minus |
BS28348.pep Sequence
Translation from 16 to 408
> BS28348.pep
MMYKLWWKLLLLQASGCLSLESRPDPRIVGGFPADIANIPYIVSIQLYGI
HHCGGSIINNHTILTAGHCLNGVPHRLLKVKVGGTSRYRKDGELFSVADL
QVHENFNPKTMDYDIGIIRLTKNLTLSRKV*
BS28348.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:50:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7829-PA | 253 | CG7829-PA | 1..130 | 1..130 | 692 | 100 | Plus |
epsilonTry-PA | 256 | CG18681-PA | 28..132 | 25..130 | 222 | 42.5 | Plus |
gammaTry-PA | 253 | CG30028-PA | 5..132 | 9..130 | 207 | 37.2 | Plus |
deltaTry-PA | 253 | CG12351-PA | 5..132 | 9..130 | 207 | 37.2 | Plus |
CG30031-PA | 253 | CG30031-PA | 5..132 | 9..130 | 207 | 37.2 | Plus |