BS28349.complete Sequence
311 bp assembled on 2012-03-08
GenBank Submission: KX801548
> BS28349.complete
GAAGTTATCAGTCGACATGCGTGCCTATTTGCTGCTTGCCCTGTTTGGAT
GTGTGCTTTTGGCCACAGTTTCCGCAAATCCGGTGGACATTGACGACTTG
GAGGACCTCGAGGAGGACAAACGAATTGCTGATGAGCAGGATAATGCTAA
CGATGATGAGAAAGACGATGAGGATTCAAATGAACCCGAGTCCGACGACG
ACTTAGATGAGCCTGAATCCCCGGAGGACGATTCCCAGAACAATGATGAT
TCCGAAAGCGACGAGAGCATCCAGTACAATCAAGATGAAGAGTAGAAGCT
TTCTAGACCAT
BS28349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-RB | 279 | CG18649-PB | 1..279 | 17..295 | 1395 | 100 | Plus |
CG18649-RA | 279 | CG18649-PA | 1..279 | 17..295 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-RB | 568 | CG18649-RB | 33..311 | 17..295 | 1395 | 100 | Plus |
CG18649-RA | 489 | CG18649-RA | 33..311 | 17..295 | 1395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:52:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15053825..15054103 | 295..17 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:52:09 has no hits.
BS28349.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:37 Download gff for
BS28349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 31..309 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:46 Download gff for
BS28349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 33..311 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:05:35 Download gff for
BS28349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 33..311 | 17..295 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:05:35 Download gff for
BS28349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15053825..15054103 | 17..295 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:46 Download gff for
BS28349.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15046925..15047203 | 17..295 | 100 | | Minus |
BS28349.pep Sequence
Translation from 16 to 294
> BS28349.pep
MRAYLLLALFGCVLLATVSANPVDIDDLEDLEEDKRIADEQDNANDDEKD
DEDSNEPESDDDLDEPESPEDDSQNNDDSESDESIQYNQDEE*
BS28349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-PB | 92 | CG18649-PB | 1..92 | 1..92 | 478 | 100 | Plus |
CG18649-PA | 92 | CG18649-PA | 1..92 | 1..92 | 478 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 828..899 | 21..92 | 149 | 38.9 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 828..899 | 21..92 | 149 | 38.9 | Plus |