BS28352.complete Sequence
269 bp assembled on 2012-03-08
GenBank Submission: KX802067
> BS28352.complete
GAAGTTATCAGTCGACATGTCCCTGCAAACGGGCTTGGCTTTCATTTTCA
CCATATTAGCCTCTGTTAGTATCGTCGCAGCAATTATTTTGTTGGGCTGG
TTCCTCATCTGGAAGGCGTTTCTATCGAAATTTCGTCTGGTTCGAGAGCT
GTTGGGTCAGGAGGAGCCGGAGGATCAGCAACCACTTGCTTGGGATCATC
AGAATCAACAGCCACACCACCACGGCAGAGCCAGGAAAGCTCGCCGAGAC
TAGAAGCTTTCTAGACCAT
BS28352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42455-RC | 237 | CG42455-PC | 1..237 | 17..253 | 1185 | 100 | Plus |
| CG42455-RB | 237 | CG42455-PB | 1..237 | 17..253 | 1185 | 100 | Plus |
| CG42455-RA | 237 | CG42455-PA | 1..237 | 17..253 | 1185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:56:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| vnc-RC | 1137 | CG11989-RC | 129..365 | 17..253 | 1185 | 100 | Plus |
| vnc-RD | 1176 | CG11989-RD | 168..404 | 17..253 | 1185 | 100 | Plus |
| vnc-RA | 1096 | CG11989-RA | 88..324 | 17..253 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:56:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9973093..9973251 | 95..253 | 795 | 100 | Plus |
| 3L | 28110227 | 3L | 9972923..9973002 | 17..96 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:56:02 has no hits.
BS28352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:38 Download gff for
BS28352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42455-RB | 157..393 | 17..253 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:53 Download gff for
BS28352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vnc-RA | 88..324 | 17..253 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:07:18 Download gff for
BS28352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vnc-RA | 88..324 | 17..253 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:07:18 Download gff for
BS28352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9972923..9973001 | 17..95 | 100 | -> | Plus |
| 3L | 9973094..9973251 | 96..253 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:53 Download gff for
BS28352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9966023..9966101 | 17..95 | 100 | -> | Plus |
| arm_3L | 9966194..9966351 | 96..253 | 100 | | Plus |
BS28352.pep Sequence
Translation from 16 to 252
> BS28352.pep
MSLQTGLAFIFTILASVSIVAAIILLGWFLIWKAFLSKFRLVRELLGQEE
PEDQQPLAWDHQNQQPHHHGRARKARRD*
BS28352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42455-PC | 78 | CG42455-PC | 1..78 | 1..78 | 407 | 100 | Plus |
| CG42455-PB | 78 | CG42455-PB | 1..78 | 1..78 | 407 | 100 | Plus |
| CG42455-PA | 78 | CG42455-PA | 1..78 | 1..78 | 407 | 100 | Plus |
