BS28359.complete Sequence
638 bp assembled on 2012-03-08
GenBank Submission: KX801247
> BS28359.complete
GAAGTTATCAGTCGACATGTCCTTTCTAGCGCAAACTATGCGTCAAATGC
TACGCCACGTGCCCAATCGCAGTTTGTTGACGGCAGGTGCCATGCGTCCA
CTGAGCATATCGCCGGTAATTGGGCAGCAAAACAAGCCGGCGACGGAATC
GGTGGATTTATCGGCCATAGCTAAGGATCAGCAGAAGGAGTGCCTGAGCA
TCTGCGAGCGCATCAACCGGCAGGTGCAAAAATCCGAGCAGGGACGACTC
TTCGCGGTTGTCCACCTGTGCGGCAAGCAATTTAAAGTAACTCCAGGAGA
TATCATCCTGGTGGAGGGATACTGGCCGCCAACGATAGGCGACGAGATCA
GCCTGGATAAGGTGCTCCTGGCCGGTGCCCGCGACTTCACGCTCGTGGGA
AGGCCCATTTTGGAGCCCGGACTCATCTTGGTGAAGGCCACCGTCGTGGA
GAAGACGCTCAGCCACACGAAGACGCACTTTAGGAAGAAGCGCAGGAAGC
AGTACATGCGCATCAACTTCCAGAGATCTCCGCACACCATGGTCCGGATC
AATTCAATTGAACTGGCTCGTCCAGTGGACGGGAATGGCGAGGGGGAGTC
TTCCTCGAGGCGCTTGTTTTAGAAGCTTTCTAGACCAT
BS28359.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:50:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-RB | 606 | CG9730-PB | 1..606 | 17..622 | 3030 | 100 | Plus |
| mRpL21-RC | 606 | CG9730-PC | 1..606 | 17..622 | 3030 | 100 | Plus |
| mRpL21-RA | 606 | CG9730-PA | 1..606 | 17..622 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:50:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-RB | 866 | CG9730-RB | 83..688 | 17..622 | 3030 | 100 | Plus |
| mRpL21-RC | 1696 | CG9730-RC | 83..688 | 17..622 | 3030 | 100 | Plus |
| mRpL21-RA | 742 | CG9730-RA | 83..688 | 17..622 | 3030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:50:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19254298..19254835 | 622..85 | 2690 | 100 | Minus |
| 3L | 28110227 | 3L | 19254908..19254979 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:50:13 has no hits.
BS28359.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:35 Download gff for
BS28359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 79..684 | 17..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:36 Download gff for
BS28359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 83..688 | 17..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:54 Download gff for
BS28359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL21-RA | 83..688 | 17..622 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:54 Download gff for
BS28359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19254298..19254833 | 87..622 | 100 | <- | Minus |
| 3L | 19254910..19254979 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:36 Download gff for
BS28359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19247398..19247933 | 87..622 | 100 | <- | Minus |
| arm_3L | 19248010..19248079 | 17..86 | 100 | | Minus |
BS28359.pep Sequence
Translation from 16 to 621
> BS28359.pep
MSFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSA
IAKDQQKECLSICERINRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVE
GYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKATVVEKTLSH
TKTHFRKKRRKQYMRINFQRSPHTMVRINSIELARPVDGNGEGESSSRRL
F*
BS28359.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL21-PB | 201 | CG9730-PB | 1..201 | 1..201 | 1022 | 100 | Plus |
| mRpL21-PC | 201 | CG9730-PC | 1..201 | 1..201 | 1022 | 100 | Plus |
| mRpL21-PA | 201 | CG9730-PA | 1..201 | 1..201 | 1022 | 100 | Plus |
