BS28360.complete Sequence
404 bp assembled on 2012-03-08
GenBank Submission: KX805912
> BS28360.complete
GAAGTTATCAGTCGACATGCAAAAAGTGCTGGGACGCATCCAGGCGCAGG
TCCTCCGCTCCCGGGCGACGAATGCATTAGCCAATGTGGTTAGACACGAG
GCCACCTCCTCCAGGACAGCGGCTAAACCAGCCGCCACATCCAAAGAATT
CCGGGAGAGACAGGTGCGATTCAACATAAAGAACGAACAGACCGAGGGTA
GACCACTTTACCTGGATGCCCAGGCCACCACTCCAATGGACCCACGTGTA
TTGGACGCTATGCTCCCCTATCTGACCAATTTCTACGGAAATCTGGTTCG
TACGCTTCGCCTTCAACGCCTGGCAAAAGATTCTGGCCTTGGGCAATCAA
CTGGGCACAACATTTGTCTGGGAATTGGACTGCAATGAAAGCTTTCTAGA
CCAT
BS28360.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Qtzl-RC | 372 | CG31864-PC | 1..372 | 17..388 | 1860 | 100 | Plus |
| Qtzl-RA | 372 | CG31864-PA | 1..372 | 17..388 | 1860 | 100 | Plus |
| CG12264-RA | 1389 | CG12264-PA | 1..277 | 17..293 | 1385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:51:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Qtzl-RC | 926 | CG31864-RC | 75..446 | 17..388 | 1860 | 100 | Plus |
| Qtzl-RA | 672 | CG31864-RA | 75..446 | 17..388 | 1860 | 100 | Plus |
| CG12264-RA | 1533 | CG12264-RA | 72..348 | 17..293 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11996000..11996243 | 145..388 | 1220 | 100 | Plus |
| 2L | 23513712 | 2L | 11999911..12000059 | 145..293 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 11995814..11995943 | 17..146 | 650 | 100 | Plus |
| 2L | 23513712 | 2L | 11999725..11999854 | 17..146 | 650 | 100 | Plus |
| 2L | 23513712 | 2L | 11992235..11992332 | 291..388 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:51:11 has no hits.
BS28360.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:36 Download gff for
BS28360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31864-RA | 23..393 | 17..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:42 Download gff for
BS28360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Qtzl-RA | 75..445 | 17..387 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:05:15 Download gff for
BS28360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Qtzl-RA | 75..445 | 17..387 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:05:15 Download gff for
BS28360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11995814..11995943 | 17..146 | 100 | -> | Plus |
| 2L | 11996002..11996242 | 147..387 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:42 Download gff for
BS28360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11995814..11995943 | 17..146 | 100 | -> | Plus |
| arm_2L | 11996002..11996242 | 147..387 | 100 | | Plus |
BS28360.pep Sequence
Translation from 16 to 387
> BS28360.pep
MQKVLGRIQAQVLRSRATNALANVVRHEATSSRTAAKPAATSKEFRERQV
RFNIKNEQTEGRPLYLDAQATTPMDPRVLDAMLPYLTNFYGNLVRTLRLQ
RLAKDSGLGQSTGHNICLGIGLQ*
BS28360.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Qtzl-PC | 123 | CG31864-PC | 1..123 | 1..123 | 618 | 100 | Plus |
| Qtzl-PA | 123 | CG31864-PA | 1..123 | 1..123 | 618 | 100 | Plus |
| CG12264-PA | 462 | CG12264-PA | 1..92 | 1..92 | 462 | 100 | Plus |
