BS28363.complete Sequence
947 bp assembled on 2012-03-08
GenBank Submission: KX800874
> BS28363.complete
GAAGTTATCAGTCGACATGTCCGAGAATAGAGTAATCCATATGTGGATGC
GATGTCTGATGCCACTGCTGCTGGCCAACTGCATTGCGGCGAATCCCAGT
TTCGAGGATCCTGACCGTAGTTTGGATATGGAGGCGAAGGACAGCAGCGT
GGTGGATACTATGGGCATGGGCATGGGCGTCCTGGATCCTACGCAGCCAA
AGCAGATGAATTACCAGAAGCCGCCATTGGGTTACAAGGACTACGATTAC
TATCTGGGATCTCGACGAATGGCAGATCCCTATGGGGCCGATAATGATCT
GAGTGCCTCGTCCGCCATTAAGATTCATGGCGAAGGCAATTTGGCTTCGC
TAAACAGGCCAGTCAGTGGTGTCGCCCACAAACCACTGCCCTGGTATGGC
GATTATTCCGGCAAACTGCTGGCCAGTGCTCCCCCGATGTACCCGTCCAG
GTCCTACGATCCCTATATTCGCCGCTACGACAGATATGATGAGCAGTACC
ATAGGAACTATCCACAGTACTTTGAGGACATGTACATGCACCGGCAACGT
TTCGATCCGTATGATAGCTATAGTCCCCGGATACCGCAGTATCCGGAACC
CTACGTTATGTATCCCGACCGCTACCCGGATGCCCCGCCTTTGAGGGATT
ATCCGAAATTGCGGCGCGGATACATCGGTGAACCCATGGCGCCCATCGAT
TCCTACAGCAGCAGCAAGTACGTCTCTTCGAAGCAGTCCGACCTGAGTTT
TCCGGTTCGTAACGAACGCATCGTATACTACGCCCACCTGCCGGAAATCG
TACGGACACCATATGATAGTGGATCACCGGAGGATCGAAACTCGGCGCCT
TACAAGCTGAACAAGAAGAAAATCAAAAATATTCAGCGGCCTTTAGCGAA
TAATTCTACCACGTATAAAATGACATTGTAGAAGCTTTCTAGACCAT
BS28363.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12507-RB | 915 | CG12507-PB | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12507-RB | 1096 | CG12507-RB | 44..961 | 17..934 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:07:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16266028..16266494 | 483..17 | 2335 | 100 | Minus |
| X | 23542271 | X | 16265377..16265830 | 934..481 | 2270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:07:22 has no hits.
BS28363.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:43 Download gff for
BS28363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 1..915 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:28 Download gff for
BS28363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 44..958 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:11:24 Download gff for
BS28363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 44..958 | 17..931 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:11:24 Download gff for
BS28363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16265380..16265827 | 484..931 | 100 | <- | Minus |
| X | 16266028..16266494 | 17..483 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:28 Download gff for
BS28363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16159413..16159860 | 484..931 | 100 | <- | Minus |
| arm_X | 16160061..16160527 | 17..483 | 100 | | Minus |
BS28363.pep Sequence
Translation from 16 to 930
> BS28363.pep
MSENRVIHMWMRCLMPLLLANCIAANPSFEDPDRSLDMEAKDSSVVDTMG
MGMGVLDPTQPKQMNYQKPPLGYKDYDYYLGSRRMADPYGADNDLSASSA
IKIHGEGNLASLNRPVSGVAHKPLPWYGDYSGKLLASAPPMYPSRSYDPY
IRRYDRYDEQYHRNYPQYFEDMYMHRQRFDPYDSYSPRIPQYPEPYVMYP
DRYPDAPPLRDYPKLRRGYIGEPMAPIDSYSSSKYVSSKQSDLSFPVRNE
RIVYYAHLPEIVRTPYDSGSPEDRNSAPYKLNKKKIKNIQRPLANNSTTY
KMTL*
BS28363.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12507-PB | 304 | CG12507-PB | 1..304 | 1..304 | 1657 | 100 | Plus |
