BS28367.complete Sequence
638 bp assembled on 2012-03-08
GenBank Submission: KX802394
> BS28367.complete
GAAGTTATCAGTCGACATGCTAAAAATTAACGAAGCAATGCCTGAAATCA
AGAGACTTTGCCTCGCCACCGAGAATAGTCATATCGCAGCCAATGCCATG
CTGCTAACAAAGATAGATGAACTCAATTCCCAAGTCCTGTCGCAGCGCGC
AGAAATCGAAAACTTGACGAGGGCGGTTAAGACACTTACGGAATTCGTTA
AGCAGTCGATGAAAACGACCAAGCCGAAGGCGAAGGGAAATCCGGACGAT
GATTTTCCAATTATGTATGAGGAGGATCTGGTCGAAGTGAATCACAAGAT
AAGCCAGGACTCCAGGGGGATCTATACGAATTCCATGCGGAAATTCCTGC
GCCAGGGAAGATTAAGCCGCACCATAAGACTCATTTTCTCCGAGGACATC
CTTCTGAACTACAATATTGATGGGAATCAGAAAAAGAAAAGACTAAAAGA
TCACGAACATCTGTTTCGTTCGCTTATGAACGCCATCGGTCAGGTGGAAC
CGACGCTACCCTCGGAAAAAGTCTTATTCAAAGCCATGAGATGCGTTAAG
AATTGCGCAGCCAAAAAGAAGGGCAAGGTAGATGATGACCCCTTGTCCGT
TTTGAGCGTGGAGAAATCATAAAAGCTTTCTAGACCAT
BS28367.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-RA | 606 | CG12112-PA | 1..606 | 17..622 | 3030 | 100 | Plus |
| CG12112-RB | 591 | CG12112-PB | 1..591 | 17..622 | 2770 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:09:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-RA | 1117 | CG12112-RA | 170..775 | 17..622 | 3030 | 100 | Plus |
| CG12112-RB | 1096 | CG12112-RB | 164..754 | 17..622 | 2770 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8559653..8559859 | 325..119 | 1035 | 100 | Minus |
| X | 23542271 | X | 8559426..8559579 | 479..326 | 770 | 100 | Minus |
| X | 23542271 | X | 8559221..8559363 | 622..480 | 715 | 100 | Minus |
| X | 23542271 | X | 8559921..8560023 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:09:45 has no hits.
BS28367.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:45 Download gff for
BS28367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..773 | 17..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:38 Download gff for
BS28367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..773 | 17..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:12:15 Download gff for
BS28367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12112-RA | 170..773 | 17..620 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:12:15 Download gff for
BS28367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8559426..8559579 | 326..479 | 100 | <- | Minus |
| X | 8559653..8559858 | 120..325 | 100 | <- | Minus |
| X | 8559921..8560023 | 17..119 | 100 | | Minus |
| X | 8559223..8559363 | 480..620 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:38 Download gff for
BS28367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8453954..8454056 | 17..119 | 100 | | Minus |
| arm_X | 8453686..8453891 | 120..325 | 100 | <- | Minus |
| arm_X | 8453256..8453396 | 480..620 | 100 | <- | Minus |
| arm_X | 8453459..8453612 | 326..479 | 100 | <- | Minus |
BS28367.pep Sequence
Translation from 16 to 621
> BS28367.pep
MLKINEAMPEIKRLCLATENSHIAANAMLLTKIDELNSQVLSQRAEIENL
TRAVKTLTEFVKQSMKTTKPKAKGNPDDDFPIMYEEDLVEVNHKISQDSR
GIYTNSMRKFLRQGRLSRTIRLIFSEDILLNYNIDGNQKKKRLKDHEHLF
RSLMNAIGQVEPTLPSEKVLFKAMRCVKNCAAKKKGKVDDDPLSVLSVEK
S*
BS28367.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12112-PA | 201 | CG12112-PA | 1..201 | 1..201 | 1014 | 100 | Plus |
| CG12112-PB | 196 | CG12112-PB | 1..196 | 1..201 | 974 | 97.5 | Plus |
| CG42854-PA | 160 | CG42854-PA | 2..158 | 35..187 | 199 | 34 | Plus |
