BS28368.complete Sequence
725 bp assembled on 2012-03-08
GenBank Submission: KX800334
> BS28368.complete
GAAGTTATCAGTCGACATGGATTTCGAGAGCAAATACTGCACCAGTCAAG
TAAATGGCACTATTACCATAACTACGCGCAAAGTCCTTGATGAAAATCTA
AAATCCTTACTGGATGAGGGAAAGGGCGAGCTGTTTCTCTCGTGTATACC
GAGGAATCACAGTTGTTCTCCGCGGTGGATTGTGGAAGTGGCCAGCGAAC
TGGGTGAAGTTTACATTATGCGCTATAAGATTGATTTTTCGGGAAATTCT
CGCGGCTACGCCTACTTGCAATATATCAATGTGGACCTCAAGGAATCGGC
AATGCAATATCTGCCAATGCGATTCCGACAGCTTTGCATGTGCTTAAGGG
TGGAGCCATCGACCAACAATCGCGAGCTGGTGCTCAAAAACGTAGAATCG
TCGCTTAGACCATGGCAAGTGTACCAGGAGATGTTGAAGATACATCCCTT
TACCATCGTTCGAGTCTACGAGTATCAATTAGACCAGTTCTTCTATATAT
TTGAGTACCGCAACAACGACTCGGCCGCAAGTGCCCATCAGAGAGTAAGG
AATTCGATCAGAAAATTCGGTGAGCATGCGCACATCTCCTGGTTGACTGC
GGAGAACATCTTGAGCAGAGCCAGCGGTAGCTTCTGTTTTCAACGGGAAG
TAAGCCAAAATCGTACTCGACGCGTTCCTCCCAGACAAAAGGGCTGTTTC
AAGTTTTAAAAGCTTTCTAGACCAT
BS28368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32364-RA | 693 | CG32364-PA | 1..693 | 17..709 | 3465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:10:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32364-RA | 1046 | CG32364-RA | 73..766 | 17..710 | 3470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8209857..8210257 | 710..310 | 2005 | 100 | Minus |
| 3L | 28110227 | 3L | 8210313..8210493 | 309..129 | 905 | 100 | Minus |
| 3L | 28110227 | 3L | 8210558..8210671 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:10:19 has no hits.
BS28368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:46 Download gff for
BS28368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32364-RA | 1..691 | 17..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:43 Download gff for
BS28368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32364-RA | 73..763 | 17..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:12:31 Download gff for
BS28368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32364-RA | 73..763 | 17..707 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:12:31 Download gff for
BS28368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8209860..8210257 | 310..707 | 100 | <- | Minus |
| 3L | 8210313..8210491 | 131..309 | 100 | <- | Minus |
| 3L | 8210558..8210671 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:43 Download gff for
BS28368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8202960..8203357 | 310..707 | 100 | <- | Minus |
| arm_3L | 8203413..8203591 | 131..309 | 100 | <- | Minus |
| arm_3L | 8203658..8203771 | 17..130 | 100 | | Minus |
BS28368.pep Sequence
Translation from 16 to 708
> BS28368.pep
MDFESKYCTSQVNGTITITTRKVLDENLKSLLDEGKGELFLSCIPRNHSC
SPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLP
MRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTIVRV
YEYQLDQFFYIFEYRNNDSAASAHQRVRNSIRKFGEHAHISWLTAENILS
RASGSFCFQREVSQNRTRRVPPRQKGCFKF*
BS28368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32364-PA | 230 | CG32364-PA | 1..230 | 1..230 | 1216 | 100 | Plus |
