BS28376.complete Sequence
443 bp assembled on 2012-03-08
GenBank Submission: KX805561
> BS28376.complete
GAAGTTATCAGTCGTCATGGCGGCATTGTGCTTAGACTTTCTCGGCTTCC
AGGAGGCACTGAAGAAGATGCGAGATGTGGACGACAAGATTATATATGCA
CTAAATGCCCTGCCAACGGAGTCGTTTAAGGGTCAAGTGAACAGTGAAAG
CACCTGTCGCGATCTGTACGCGAAGCTCCAGGAGTCACACTTGGCCAGGC
AAGAAAGCATACGCAGTTGCATAACAATTTCGGCTAGTAATCTGAAGAAG
CTAAGGGAAAAGCGGGAGACCCAGCCGGATGATGTGGATACGGATAACCA
GTTTAGGGCGGAGCAGCGCAAGCTGCGGGTTCTCCAGGCCGAGCTCAATG
TCGAGGACATCATTAAAGATCGTTCCTACAAGACCTTCAATGAACGATGC
CGGTCCTATTTTCATGCTGGCCAATAGAAGCTTTCTAGACCAT
BS28376.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:16:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-RA | 411 | CG15881-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
| CG15881-RC | 360 | CG15881-PC | 1..360 | 68..427 | 1800 | 100 | Plus |
| CG15881-RB | 360 | CG15881-PB | 1..360 | 68..427 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-RA | 660 | CG15881-RA | 108..518 | 17..427 | 2055 | 100 | Plus |
| CG15881-RC | 671 | CG15881-RC | 108..529 | 17..427 | 1910 | 97.4 | Plus |
| CG15881-RB | 1642 | CG15881-RB | 1123..1500 | 50..427 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:16:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19806303..19806452 | 50..199 | 750 | 100 | Plus |
| 3L | 28110227 | 3L | 19806509..19806632 | 199..322 | 620 | 100 | Plus |
| 3L | 28110227 | 3L | 19806684..19806790 | 321..427 | 535 | 100 | Plus |
| 3L | 28110227 | 3L | 19806202..19806238 | 17..53 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:16:17 has no hits.
BS28376.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:49 Download gff for
BS28376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RA | 89..499 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:59 Download gff for
BS28376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RA | 108..518 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:24 Download gff for
BS28376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15881-RA | 108..518 | 17..427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:24 Download gff for
BS28376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19806510..19806632 | 200..322 | 100 | -> | Plus |
| 3L | 19806686..19806790 | 323..427 | 100 | | Plus |
| 3L | 19806306..19806452 | 53..199 | 100 | -> | Plus |
| 3L | 19806202..19806237 | 17..52 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:59 Download gff for
BS28376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19799302..19799337 | 17..52 | 100 | -> | Plus |
| arm_3L | 19799406..19799552 | 53..199 | 100 | -> | Plus |
| arm_3L | 19799610..19799732 | 200..322 | 100 | -> | Plus |
| arm_3L | 19799786..19799890 | 323..427 | 100 | | Plus |
BS28376.pep Sequence
Translation from 16 to 426
> BS28376.pep
MAALCLDFLGFQEALKKMRDVDDKIIYALNALPTESFKGQVNSESTCRDL
YAKLQESHLARQESIRSCITISASNLKKLREKRETQPDDVDTDNQFRAEQ
RKLRVLQAELNVEDIIKDRSYKTFNERCRSYFHAGQ*
BS28376.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15881-PA | 136 | CG15881-PA | 1..136 | 1..136 | 693 | 100 | Plus |
| CG15881-PC | 119 | CG15881-PC | 1..119 | 18..136 | 607 | 100 | Plus |
| CG15881-PB | 119 | CG15881-PB | 1..119 | 18..136 | 607 | 100 | Plus |
