BS28377.complete Sequence
530 bp assembled on 2012-03-08
GenBank Submission: KX802281
> BS28377.complete
GAAGTTATCAGTCGACATGAACTTCTTGAAAAAGCTGTTGCCCCAGGTGG
CGACCGAGGTGCAGCAGCTCAGCCGGTCAGGATTCCACACCAGCTCCGTG
TGCTGTCGCGTGCAATCCGGGCGATACCGCATAACCACAAAGCGAAACAG
GCCTCTTACCTACGAGATGGCCAATCCGCCGCATTTTATTGGCCACCGCA
AATCGTGGAACTCATGGAACACGTCAACAATGAAGGATGCCCTGCGTCCG
TCCCAGACCGCCATAGAGGATGTGTTCATCCGCAAGTTTGTCACCGGCAC
ATGGCATGCCCTCGTCTGCTCCGAGGTCATTATCAAGCGACAGCACAACA
CCATTAGGATCGCGGCCCTTATTCGGCAGGCGATTACACCGCGAAAAATG
TACTTCCTTATTGGTTACACGGAGGAGCTGCTCTCCTATTGGATGCAGTG
TCCAGTGACCTTGGAACTGCAAACGGTGGGCGATAAAAAGGACGTGGTCT
TCAAATACATTTAGAAGCTTTCTAGACCAT
BS28377.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:17:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS24-RA | 498 | CG13608-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS24-RA | 600 | CG13608-RA | 61..558 | 17..514 | 2490 | 100 | Plus |
| CG6182-RA | 1373 | CG6182-RA | 1029..1318 | 514..225 | 1450 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24162871..24163160 | 514..225 | 1450 | 100 | Minus |
| 3R | 32079331 | 3R | 24163218..24163409 | 224..33 | 960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:17:15 has no hits.
BS28377.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:50 Download gff for
BS28377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS24-RA | 40..537 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:02 Download gff for
BS28377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS24-RA | 61..558 | 17..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:45 Download gff for
BS28377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS24-RA | 61..558 | 17..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:45 Download gff for
BS28377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24163218..24163407 | 35..224 | 100 | <- | Minus |
| 3R | 24163468..24163485 | 17..34 | 100 | | Minus |
| 3R | 24162871..24163160 | 225..514 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:02 Download gff for
BS28377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19988593..19988882 | 225..514 | 100 | <- | Minus |
| arm_3R | 19988940..19989129 | 35..224 | 100 | <- | Minus |
| arm_3R | 19989190..19989207 | 17..34 | 100 | | Minus |
BS28377.pep Sequence
Translation from 16 to 513
> BS28377.pep
MNFLKKLLPQVATEVQQLSRSGFHTSSVCCRVQSGRYRITTKRNRPLTYE
MANPPHFIGHRKSWNSWNTSTMKDALRPSQTAIEDVFIRKFVTGTWHALV
CSEVIIKRQHNTIRIAALIRQAITPRKMYFLIGYTEELLSYWMQCPVTLE
LQTVGDKKDVVFKYI*
BS28377.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS24-PA | 165 | CG13608-PA | 1..165 | 1..165 | 873 | 100 | Plus |
