BS28381.complete Sequence
1184 bp assembled on 2012-03-08
GenBank Submission: KX805094
> BS28381.complete
GAAGTTATCAGTCGACATGATTGGAAAAGCATTGCTTCTGCTGGGCTGTG
TGCTGCTCTTCGCTTTTGGTGAAGCCAACCAGGAACTGGAGACTCTGCTG
CAGAAGCAACAGGTGGACTTGCAGTTGTCTGGCGAGGAAGTGGCTGCTTT
GCGTCCACTGTACCTAGAGTTTCAGGCGCAGTACAACTATCTGTACAGCC
TGAGGCTCCAGAGCGGCGATGGGAGTGATCAGAATCCCGCGGAGGAGCCT
GAACTGGATAGCAACTACCTACGGGCATTTGAAGACTTTCGCGAAAAGTT
CTCCATTTACTTGGATGAGAAACCTCGAGTGGTGTATGACACAAAATTGC
CCACTGTCGACGAGATCATGGGAAAGCCCAGTCCCGACTTCACACCAAAT
CAGAGGGCGGAATTCGAGGATCTCAGGGAGATTATTCAGGATGTTATTGA
CGAGGCACAGTTCGGCATTGACGACTTGGTGGAGAGGGCCATCCAACTGG
AGACGAATCTGCTGAAGCTGAACAAACCAAAGATCGTGACCGCAGCCATT
GCCGGATTGGGATACATGTGGAACTACTGGGGCCGCGGAAGTCAGGCCGC
CTATTGCAGTTACTCGCTGGTCCCAGAGTTCCAGATAGGTCTGCAGGCCA
TTAACGATGGCGTTGATTGCTACTCCCGCACCATGGCCTTGGTAATGCGC
ATTCAGAATGAAACAGTGGCCGCTGTGAAGGAGGTTAAACGCAATGTCAG
TAGTCTTGTGAAGATTTGCAAGAAGATTGCCGCCAAGCAGACCACCGTTG
GCAAAATCCTGTCGGGTACAGTAAACGCTCTCAGTGCGATCCGCCGGCTA
CACGACATCATCGCTGTCGGAATCGATGTCTACGGCAAAATCAACAACCA
GTTGCCGGAGGAGGCCATCCACTCTGCGGAGTGTGGAGTGGTGTTCGTCA
ACAGCATACCCCAAATGTTGGAAACGGCCCAGAATCTGACCACTTGCATT
ACCTACGTGAATCCGGATAAGCCCGACTTCGAATTCACGCATCCCGAAGA
GGATCGCTATTGGAACACTGGCGCTGATCCTCCGGAAATACCCCATGAAA
ACGTGGTGGACGATGATGACGATGATACGGACTATCCGGAGTTGGACGAC
TATGAGGATCACAGATAAAAGCTTTCTAGACCAT
BS28381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31463-RA | 1152 | CG31463-PA | 1..1152 | 17..1168 | 5760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31463-RA | 1275 | CG31463-RA | 32..1183 | 17..1168 | 5760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:20:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8292366..8293517 | 17..1168 | 5760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:20:25 has no hits.
BS28381.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:52 Download gff for
BS28381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 16..1165 | 17..1166 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:15 Download gff for
BS28381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 32..1181 | 17..1166 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:47 Download gff for
BS28381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 32..1181 | 17..1166 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:47 Download gff for
BS28381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8292366..8293515 | 17..1166 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:15 Download gff for
BS28381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4118088..4119237 | 17..1166 | 100 | | Plus |
BS28381.pep Sequence
Translation from 16 to 1167
> BS28381.pep
MIGKALLLLGCVLLFAFGEANQELETLLQKQQVDLQLSGEEVAALRPLYL
EFQAQYNYLYSLRLQSGDGSDQNPAEEPELDSNYLRAFEDFREKFSIYLD
EKPRVVYDTKLPTVDEIMGKPSPDFTPNQRAEFEDLREIIQDVIDEAQFG
IDDLVERAIQLETNLLKLNKPKIVTAAIAGLGYMWNYWGRGSQAAYCSYS
LVPEFQIGLQAINDGVDCYSRTMALVMRIQNETVAAVKEVKRNVSSLVKI
CKKIAAKQTTVGKILSGTVNALSAIRRLHDIIAVGIDVYGKINNQLPEEA
IHSAECGVVFVNSIPQMLETAQNLTTCITYVNPDKPDFEFTHPEEDRYWN
TGADPPEIPHENVVDDDDDDTDYPELDDYEDHR*
BS28381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31463-PA | 383 | CG31463-PA | 1..383 | 1..383 | 1991 | 100 | Plus |
