BS28382.complete Sequence
710 bp assembled on 2012-03-08
GenBank Submission: KX801561
> BS28382.complete
GAAGTTATCAGTCGACATGCCACGACACAGCAGAGCCAAGCGCGCACCCA
GGCCGTCGGCGAACAACTCAAAGTCGCCGAACGACGACGACACGGCCTTC
CGCTCGCCGGAGCCAGAAGACGGCACCGACTACGGCCTCGAATTCACCAC
CAGCCAACTGACGCTTCAGGACAACAATCGGCGTTCCTCGACGTTGCGCA
GGGACGCCGGACGGAGGCAGCCGGCAGCGAGAGACAGCTCCACCAGTGGC
GAGGAGGAGGACCAGGAGAATCGCTATCCCACAACCAGATCGCCGCAGAC
GCGTCGAATGACCGTGCAGCAGGAAAGCAAAACGCGAGCAGCAGGGCCAG
TTGCTGCGCAAAACCAGACCAGGCGGCGCAAAGCGGCCAATCCCATGAGC
AGAGCCAAGAGAATGGATCGTGAGATCCGGCGACTGCAGCACCATCCCGG
CACACTGATACCCAAGCTGCCGTTCTCGCGTCTAGTGCGCGAGTTCATCG
TGAAGTACAGCGACGACGAGCCGCTAAGGGTCACCGAAGGCGCCCTATTG
GCCATGCAGGAGTCGTGCGAGATGTACTTGACGCAGCGGCTCGCCGACTC
CTACATGCTAACCAAGCATCGCAATCGCGTCACACTGGAGGTGCGCGACA
TGGCATTGATGGCCTACATCTGCGACCGGGGTCGGCAATTTTAGAAGCTT
TCTAGACCAT
BS28382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:12:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cid-RA | 678 | CG13329-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:12:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cid-RA | 1015 | CG13329-RA | 75..752 | 17..694 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13485691..13486368 | 17..694 | 3390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:12:35 has no hits.
BS28382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:47 Download gff for
BS28382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cid-RA | 91..768 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:50 Download gff for
BS28382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cid-RA | 75..752 | 17..694 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:13:17 Download gff for
BS28382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cid-RA | 75..752 | 17..694 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:13:17 Download gff for
BS28382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13485691..13486368 | 17..694 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:50 Download gff for
BS28382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9373196..9373873 | 17..694 | 100 | | Plus |
BS28382.pep Sequence
Translation from 16 to 693
> BS28382.pep
MPRHSRAKRAPRPSANNSKSPNDDDTAFRSPEPEDGTDYGLEFTTSQLTL
QDNNRRSSTLRRDAGRRQPAARDSSTSGEEEDQENRYPTTRSPQTRRMTV
QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPK
LPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTK
HRNRVTLEVRDMALMAYICDRGRQF*
BS28382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:51:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cid-PA | 225 | CG13329-PA | 1..225 | 1..225 | 1160 | 100 | Plus |