BS28386.complete Sequence
401 bp assembled on 2012-03-08
GenBank Submission: KX802517
> BS28386.complete
GAAGTTATCAGTCGACATGTCCTACGCCGGCTATAGCCAGCTGCCCAGCG
GCAGCGACCAGGAGCGCAGGCAGGCGCAGCTCGCGGCCAGCACCTACGAC
GTGCTACAGCGGACGACGGACAGTATCCAGCGATCCAACCAGATTGCCAT
CGAAACGGAGAACATGGGGGCGGAGGTACTCGGCGAACTGGGCGAGCAGA
GGGAGTCGCTGCTACGCACCACGCGCCGCCTGGAGGACGCCGATCAGGAT
CTGTCCAAATCGAGGGTCATCATTCGGAAGTTGAGCAGGGAGGTGCTCTA
CAACAAGATCATCCTAATCCTGATTATCATTCTGGAGGTGGGCATACTCG
TCGGCTTGCTGGTGCTGAAGTTCGCTCACCTGTGAAAGCTTTCTAGACCA
T
BS28386.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:20:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44009-RA | 369 | CG44009-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
| CG44009-RB | 222 | CG44009-PB | 1..222 | 164..385 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:20:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44009-RA | 571 | CG44009-RA | 84..452 | 17..385 | 1845 | 100 | Plus |
| CG44009-RB | 977 | CG44009-RB | 510..858 | 37..385 | 1745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:20:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18400009..18400220 | 174..385 | 1060 | 100 | Plus |
| 3R | 32079331 | 3R | 18399792..18399953 | 17..178 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:20:37 has no hits.
BS28386.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:53 Download gff for
BS28386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| koko-RF | 60..427 | 17..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:17 Download gff for
BS28386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44009-RA | 84..451 | 17..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:15:54 Download gff for
BS28386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44009-RA | 84..451 | 17..384 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:15:54 Download gff for
BS28386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18399792..18399950 | 17..175 | 100 | -> | Plus |
| 3R | 18400011..18400219 | 176..384 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:17 Download gff for
BS28386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14225514..14225672 | 17..175 | 100 | -> | Plus |
| arm_3R | 14225733..14225941 | 176..384 | 100 | | Plus |
BS28386.pep Sequence
Translation from 16 to 384
> BS28386.pep
MSYAGYSQLPSGSDQERRQAQLAASTYDVLQRTTDSIQRSNQIAIETENM
GAEVLGELGEQRESLLRTTRRLEDADQDLSKSRVIIRKLSREVLYNKIIL
ILIIILEVGILVGLLVLKFAHL*
BS28386.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44009-PA | 122 | CG44009-PA | 1..122 | 1..122 | 583 | 100 | Plus |
| CG44009-PB | 73 | CG44009-PB | 1..73 | 50..122 | 342 | 100 | Plus |
