BS28387.complete Sequence
740 bp assembled on 2012-03-08
GenBank Submission: KX802894
> BS28387.complete
GAAGTTATCAGTCGACATGAGCAAACTAGACGATCTGCTGTCCAAAAAGA
AGACGGTGGTGCCCGTCTTGGATCTCAGCCGCAGCAATATTCAGACCGTC
GAGGAGTTCAAACGGCTGCTGGAGAAGGTGCCCGACTACAAGATGCGACC
GGTGAAGGTGCGCGCCGAGGAGATAAAGATCCGGGAGAAGGACTACGCCT
TCAAGATGCCCAAAAAGGAGATGCGAAAGCTGCTGCGAGCCAACGGGGAA
CGAGAGGCGATGTACACCTATGCGGATCCGGTGCCCGGTGAAATGAAGGA
TGTGGTGCTGATGGAACTGTGTGCGGTGCCCATCGATTGGAAGATGCTGA
CCACGCTGAGGCCCAAGAACAAACAGGAGGAGGAATACTTCAGCCGCATG
GTTGAGATGGGAAAGTTGGAGCTTAAAACCGAGGCTCGCGATCGCCGAGA
GTTTGCCCTAAACAATTGTGTCAAGAAAATCAAGAATAAATCGGGAATTG
TGGAAACTCGACTGATGACCTGTGAGTCCTGCGGCGAGGAAATGTGTTGT
GGCAAGACTTGCGGCGACTTCAATTACGATCTGTACATTCGGGTTGAGGC
CAGGGTGATTAAGCCGAAACCGGCACCTTTGTCCTCCAACAAGGCCAAAT
TAAATGGACGCAAAAAGTCATCGGTGGGCGGAACCAAGATCAAGGTCAAA
AAGGCATCAAGCAAAGCCAGCTAAAAGCTTTCTAGACCAT
BS28387.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:21:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6216-RB | 708 | CG6216-PB | 1..708 | 17..724 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:21:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6216-RB | 1073 | CG6216-RB | 37..745 | 17..725 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:21:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11150135..11150670 | 552..17 | 2680 | 100 | Minus |
3L | 28110227 | 3L | 11149906..11150080 | 725..551 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:21:27 has no hits.
BS28387.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:53 Download gff for
BS28387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6216-RB | 37..742 | 17..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:21 Download gff for
BS28387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6216-RB | 37..742 | 17..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:16:14 Download gff for
BS28387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6216-RB | 37..742 | 17..722 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:16:14 Download gff for
BS28387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11149909..11150079 | 552..722 | 100 | <- | Minus |
3L | 11150136..11150670 | 17..551 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:21 Download gff for
BS28387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11143009..11143179 | 552..722 | 100 | <- | Minus |
arm_3L | 11143236..11143770 | 17..551 | 100 | | Minus |
BS28387.pep Sequence
Translation from 16 to 723
> BS28387.pep
MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRA
EEIKIREKDYAFKMPKKEMRKLLRANGEREAMYTYADPVPGEMKDVVLME
LCAVPIDWKMLTTLRPKNKQEEEYFSRMVEMGKLELKTEARDRREFALNN
CVKKIKNKSGIVETRLMTCESCGEEMCCGKTCGDFNYDLYIRVEARVIKP
KPAPLSSNKAKLNGRKKSSVGGTKIKVKKASSKAS*
BS28387.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6216-PB | 235 | CG6216-PB | 1..235 | 1..235 | 1206 | 100 | Plus |