BS28388.complete Sequence
680 bp assembled on 2012-04-25
GenBank Submission: KX805783
> BS28388.complete
GAAGTTATCAGTCGACATGAATCATCCAATACTCTACTCGTATTGGCGCA
GCTCGTGCTCCTGGCGCGTGCGCATTGCGATGAACCTGAAGGAGATACCC
TACGACATCAAGCCGATCAGCCTGATCAAATCCGGTGGCGAGCAGCACTG
CAATGAGTACCGCGAGGTGAATCCAATGGAGCAGGTGCCCGCCCTACAGA
TTGATGGACACACCCTCATCGAATCGGTAGCCATAATGCACTACCTGGAG
GAAACACGTCCCCAGCGACCACTCCTGCCACAGGACGTCCACAAGCGGGC
CAAGGTGCGCGAAATAGTCGAGATCATTTGCTCTGGCATCCAGCCCCTGC
AGAACCTCATCGTGCTCATCCATGTGGGCGAGGAGAAGAAGAAGGAGTGG
GCCCAGCACTGGATTACACGAGGCTTCCGGGCGGTTGAGAAGGCGCTGTC
CACTTCGGCCGGCAAATATTGCGTGGGCGATGAGATCTCCATGGCGGACT
GCTGCCTCGTACCTCAGGTGTTCAATGCCCGAAGATTCCACGTCGACTTG
CGACCGTATCCCATAATTCTGCGCATCGATCGCGAACTGGAGAGCAATCC
GGCATTCCGGGCGGCCCATCCCTCCAATCAACCGGACTGTCCGCCGGAGC
TGCCCAACAAATAGAAGCTTTCTAGACCAT
BS28388.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-RC | 648 | CG9363-PC | 1..648 | 17..664 | 3240 | 100 | Plus |
| GstZ2-RA | 684 | CG9363-PA | 46..684 | 26..664 | 3195 | 100 | Plus |
| GstZ2-RB | 663 | CG9363-PB | 25..663 | 26..664 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-RC | 1093 | CG9363-RC | 40..690 | 16..666 | 3255 | 100 | Plus |
| GstZ2-RA | 1062 | CG9363-RA | 75..715 | 26..666 | 3205 | 100 | Plus |
| GstZ2-RB | 2202 | CG9363-RB | 383..1023 | 26..666 | 3205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9458203..9458534 | 534..203 | 1660 | 100 | Minus |
| 3R | 32079331 | 3R | 9458595..9458772 | 203..26 | 890 | 100 | Minus |
| 3R | 32079331 | 3R | 9457994..9458127 | 666..533 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:19:41 has no hits.
BS28388.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:52 Download gff for
BS28388.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9363-RC | 35..676 | 17..658 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:34 Download gff for
BS28388.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstZ2-RC | 41..682 | 17..658 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:57 Download gff for
BS28388.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstZ2-RC | 41..682 | 17..658 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:57 Download gff for
BS28388.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9458002..9458125 | 535..658 | 100 | <- | Minus |
| 3R | 9458203..9458533 | 204..534 | 100 | <- | Minus |
| 3R | 9458595..9458778 | 17..203 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:34 Download gff for
BS28388.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5283724..5283847 | 535..658 | 100 | <- | Minus |
| arm_3R | 5283925..5284255 | 204..534 | 100 | <- | Minus |
| arm_3R | 5284317..5284500 | 17..203 | 97 | | Minus |
BS28388.pep Sequence
Translation from 16 to 663
> BS28388.pep
MNHPILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKSGGEQHCNEYRE
VNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLLPQDVHKRAKVREI
VEIICSGIQPLQNLIVLIHVGEEKKKEWAQHWITRGFRAVEKALSTSAGK
YCVGDEISMADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNPAFRAA
HPSNQPDCPPELPNK*
BS28388.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-PC | 215 | CG9363-PC | 1..215 | 1..215 | 1156 | 100 | Plus |
| GstZ2-PB | 220 | CG9363-PB | 9..220 | 4..215 | 1137 | 100 | Plus |
| GstZ2-PA | 227 | CG9363-PA | 16..227 | 4..215 | 1137 | 100 | Plus |
| GstZ1-PA | 246 | CG9362-PA | 34..246 | 4..215 | 789 | 67.1 | Plus |
| gfzf-PD | 234 | CG33546-PD | 3..181 | 6..184 | 147 | 25.5 | Plus |
