BS28392.complete Sequence
419 bp assembled on 2012-03-08
GenBank Submission: KX803247
> BS28392.complete
GAAGTTATCAGTCGACATGAAGGTTGTGTGCAGCATAGCTGTACTATGGA
TTTGCTTGATAACTATGTGGCAATCAGCTGGCCGCGTTAACGCAGAGGGT
TGCCTAAAGCACCACAATCTGACCAGTGCCCAAGTGCAGGCAGTGGCTCC
ATCCACTCCCGTTGCGGATGTTCCAGTGGCCGTTAAGTGCTATAGCCGGT
GTCTGATCCAGGATTATTTCGGTGATGATGGGAAAATCGATCTGCAGAAG
GTGGGAAAGCGAGGATCTCAAGAGGACCACGTGATTTTGTCCCAGTGTAA
GCAGCAGTTCGATGGCGTCACCAATCTGGACACGTGCGACTATCCATACC
TGATTCTCCAGTGTTATTTTAAGGGCAAGCAGAGTGGAACTATCGCCTCG
TAAAAGCTTTCTAGACCAT
BS28392.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:24:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp18a-RA | 387 | CG15883-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:24:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp18a-RA | 734 | CG15883-RA | 21..412 | 12..403 | 1945 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19135403..19135739 | 403..67 | 1685 | 100 | Minus |
X | 23542271 | X | 19135793..19135848 | 67..12 | 265 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:24:54 has no hits.
BS28392.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 17:47:57 Download gff for
BS28392.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 26..410 | 17..401 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:36 Download gff for
BS28392.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 26..410 | 17..401 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:41 Download gff for
BS28392.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 26..410 | 17..401 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:41 Download gff for
BS28392.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19135405..19135738 | 68..401 | 100 | <- | Minus |
X | 19135793..19135843 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:36 Download gff for
BS28392.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19029438..19029771 | 68..401 | 100 | <- | Minus |
arm_X | 19029826..19029876 | 17..67 | 100 | | Minus |
BS28392.pep Sequence
Translation from 16 to 402
> BS28392.pep
MKVVCSIAVLWICLITMWQSAGRVNAEGCLKHHNLTSAQVQAVAPSTPVA
DVPVAVKCYSRCLIQDYFGDDGKIDLQKVGKRGSQEDHVILSQCKQQFDG
VTNLDTCDYPYLILQCYFKGKQSGTIAS*
BS28392.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp18a-PA | 128 | CG15883-PA | 1..128 | 1..128 | 686 | 100 | Plus |