BS28395.complete Sequence
1064 bp assembled on 2012-04-18
GenBank Submission: KX804226
> BS28395.complete
GAAGTTATCAGTCGACATGTCGATATCAGCTTCGCACCCGTGCGGGTTAA
ACGCTGATGGCACAGCCACCCAGTATAAAGAATCTACGGCCACCATACAA
ACTTCTGGTCTTCAGTCATCACCTAGGTCCTTTCTACCAGAGCGAGAGGA
TACGTTAGAGTACTTCATAAAGTTTCCGAAGCCTTCATCTAAAAATGAGT
TTGTACTAGCTAAGGACCATGATGGCGAGGACAGCCACGTGCCCATTGTC
ATGCTGTTGGGGTGGGCGGGCTGTCAGGATCGATACCTCATGAAATACTC
AAAAATTTACGAGGAGCGGGGCTTAATTACTGTGCGATACACGGCTCCGG
TAGACAGCCTATTTTGGAAGCGATCTGAAATGATTCCTATCGGCGAGAAA
ATCCTTAAACTAATCCAGGACATGAATTTTGACGCCCATCCACTAATATT
TCACATATTTTCCAATGGCGGAGCCTACTTGTACCAACATATTAATTTAG
CTGTGATCAAGCACAAGTCTCCGCTGCAAGTTCGCGGCGTGATTTTTGAC
TCTGCTCCTGGGGAGCGTAGGATAATAAGCCTGTATCGCGCCATTACAGC
CATCTATGGTAGGGAAAAACGCTGCAACTGTTTGGCCGCACTGGTTATAA
CCATTACACTCAGTATTATGTGGTTTGTGGAGGAATCAATTTCTGCCTTG
AAAAGCCTATTCGTGCCGTCTTCGCCAGTACGCCCCAGTCCATTTTGCGA
CCTTAAAAACGAAGCCAATAGATACCCACAGCTTTTTCTGTATTCGAAAG
GTGACATTGTGATTCCCTATCGAGATGTGGAAAAATTTATTCGTCTTAGA
CGCGATCAGGGTATTCAGGTATCGTCAGTATGCTTTGAGGATGCCGAGCA
CGTTAAGATTTACACCAAATATCCCAAGCAGTACGTCCAGTGTGTGTGTA
ATTTTATTAGGAACTGCATGACAATTCCTCCTCTCAAGGAGGCTGTTAAT
TCTGAGCCATCCGAAAGTGTGTCTCGGGTTAACCTAAAATACGATTAGAA
GCTTTCTAGACCAT
BS28395.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8245-RA | 1032 | CG8245-PA | 1..1032 | 17..1048 | 5160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8245-RA | 1316 | CG8245-RA | 145..1176 | 17..1048 | 5160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5669479..5669846 | 681..1048 | 1840 | 100 | Plus |
| 2R | 25286936 | 2R | 5669058..5669420 | 321..683 | 1815 | 100 | Plus |
| 2R | 25286936 | 2R | 5668694..5668998 | 17..321 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:58:41 has no hits.
BS28395.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 10:59:12 Download gff for
BS28395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 135..1166 | 17..1048 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:13 Download gff for
BS28395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 145..1176 | 17..1048 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:41:08 Download gff for
BS28395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 145..1176 | 17..1048 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:41:08 Download gff for
BS28395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5668694..5668998 | 17..321 | 100 | -> | Plus |
| 2R | 5669059..5669419 | 322..682 | 100 | -> | Plus |
| 2R | 5669481..5669846 | 683..1048 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:13 Download gff for
BS28395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1556199..1556503 | 17..321 | 100 | -> | Plus |
| arm_2R | 1556564..1556924 | 322..682 | 100 | -> | Plus |
| arm_2R | 1556986..1557351 | 683..1048 | 100 | | Plus |
BS28395.pep Sequence
Translation from 16 to 1047
> BS28395.pep
MSISASHPCGLNADGTATQYKESTATIQTSGLQSSPRSFLPEREDTLEYF
IKFPKPSSKNEFVLAKDHDGEDSHVPIVMLLGWAGCQDRYLMKYSKIYEE
RGLITVRYTAPVDSLFWKRSEMIPIGEKILKLIQDMNFDAHPLIFHIFSN
GGAYLYQHINLAVIKHKSPLQVRGVIFDSAPGERRIISLYRAITAIYGRE
KRCNCLAALVITITLSIMWFVEESISALKSLFVPSSPVRPSPFCDLKNEA
NRYPQLFLYSKGDIVIPYRDVEKFIRLRRDQGIQVSSVCFEDAEHVKIYT
KYPKQYVQCVCNFIRNCMTIPPLKEAVNSEPSESVSRVNLKYD*
BS28395.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8245-PA | 343 | CG8245-PA | 1..343 | 1..343 | 1797 | 100 | Plus |
