BS28502.complete Sequence
218 bp assembled on 2012-03-26
GenBank Submission: KX801338
> BS28502.complete
GAAGTTATCAGTCGACATGTTGTTACAATCGATATTAATGAAAATATTGG
CCGTTTTTTTGGTCTGCTGGCTGGGACACGTCACAGCCCAGTCATCTGCC
GATTATATAGAGCTTGAAATTGGTTCAAGGGGTGAAGGTCCACCGGAAAA
GACGGAATTTCCCTGGGGCAATGATGACCAGGATCTTGAAGCAACATTTT
AAAAGCTTTCTAGACCAT
BS28502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43071-RC | 186 | CG43071-PC | 1..186 | 17..202 | 930 | 100 | Plus |
CG43071-RB | 186 | CG43071-PB | 1..186 | 17..202 | 930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43071-RC | 514 | CG43071-RC | 26..211 | 17..202 | 930 | 100 | Plus |
CG43071-RB | 316 | CG43071-RB | 26..211 | 17..202 | 930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18864924..18865056 | 202..70 | 665 | 100 | Minus |
2R | 25286936 | 2R | 18865140..18865193 | 70..17 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:07:11 has no hits.
BS28502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:00 Download gff for
BS28502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RA | 1..163 | 38..200 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:19 Download gff for
BS28502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RB | 31..209 | 22..200 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:06 Download gff for
BS28502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RB | 31..209 | 22..200 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:06 Download gff for
BS28502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18864926..18865055 | 71..200 | 100 | <- | Minus |
2R | 18865140..18865188 | 22..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:19 Download gff for
BS28502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14752431..14752560 | 71..200 | 100 | <- | Minus |
arm_2R | 14752645..14752693 | 22..70 | 100 | | Minus |
BS28502.pep Sequence
Translation from 16 to 201
> BS28502.pep
MLLQSILMKILAVFLVCWLGHVTAQSSADYIELEIGSRGEGPPEKTEFPW
GNDDQDLEATF*
BS28502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43071-PC | 61 | CG43071-PC | 1..61 | 1..61 | 322 | 100 | Plus |
CG43071-PB | 61 | CG43071-PB | 1..61 | 1..61 | 322 | 100 | Plus |