BS28503.complete Sequence
557 bp assembled on 2012-03-26
GenBank Submission: KX803925
> BS28503.complete
GAAGTTATCAGTCGACATGACAATCTACGAGCAGATCAGTGATCAGTTTT
GCCGCGTTGTGCACACCAACCTCAAGATACCACTATCCTATTGCGAAACA
CGCTCACACTGGAAATTCTCGAAAAGTATCGATACAATGATATTTTTCTA
TACCCTTAGCTTTGGTATCCTTCGAGTGATACTACATTTTATAGATTTGG
TGAACATTTACTTCAGAGGGATGCGCTTGAGGCGGCCAAGCAATCTCTTG
ATCTTGAGGGGCGAGAATTCGCGGGGCTTTCGAGTTCTCAAGCACCTTTT
AATGCTGAAAGCATGGATATTAGTCATATACGGCATGGTATTCATCAAGC
CGCATTACATCAATCCTTTCGTTGTGCTTTCTATCATCATTTTGACCATC
GATGTGTTTGTATTGGTGTTGGATATCCTGCGAAAGGCCAGGATACCTCT
TGACCGCAGGGTGACCCTTTGGGAAATGATGCTCAACTTGTGCTGTGTTT
TTTACGTACAGTGGATTCTCAAGCAACAGATCCAGTATTAGAAGCTTTCT
AGACCAT
BS28503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43075-RA | 525 | CG43075-PA | 1..525 | 17..541 | 2625 | 100 | Plus |
| CG33252-RA | 525 | CG33252-PA | 8..516 | 24..532 | 1345 | 84.3 | Plus |
| CG32588-RA | 513 | CG32588-PA | 1..380 | 17..411 | 500 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43075-RA | 757 | CG43075-RA | 78..603 | 16..541 | 2630 | 100 | Plus |
| CG33252-RA | 819 | CG33252-RA | 101..609 | 24..532 | 1345 | 84.3 | Plus |
| CG32588-RA | 677 | CG32588-RA | 77..461 | 12..411 | 510 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15220425..15220622 | 541..344 | 990 | 100 | Minus |
| X | 23542271 | X | 15220693..15220858 | 343..178 | 830 | 100 | Minus |
| X | 23542271 | X | 15220937..15221099 | 178..16 | 815 | 100 | Minus |
| X | 23542271 | X | 16896690..16896846 | 342..186 | 500 | 87.9 | Minus |
| X | 23542271 | X | 16896425..16896613 | 532..344 | 450 | 82.5 | Minus |
| X | 23542271 | X | 16896935..16897087 | 176..24 | 450 | 86.3 | Minus |
| X | 23542271 | X | 15206397..15206560 | 175..12 | 430 | 84.1 | Minus |
Blast to na_te.dros performed 2014-11-28 04:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 4576..4639 | 199..137 | 110 | 65.6 | Minus |
BS28503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:01 Download gff for
BS28503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43075-RA | 1..525 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:21 Download gff for
BS28503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43075-RA | 79..603 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:08 Download gff for
BS28503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43075-RA | 79..603 | 17..541 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:08 Download gff for
BS28503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15220937..15221098 | 17..178 | 100 | | Minus |
| X | 15220425..15220622 | 344..541 | 100 | <- | Minus |
| X | 15220693..15220857 | 179..343 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:21 Download gff for
BS28503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15114458..15114655 | 344..541 | 100 | <- | Minus |
| arm_X | 15114726..15114890 | 179..343 | 100 | <- | Minus |
| arm_X | 15114970..15115131 | 17..178 | 100 | | Minus |
BS28503.pep Sequence
Translation from 16 to 540
> BS28503.pep
MTIYEQISDQFCRVVHTNLKIPLSYCETRSHWKFSKSIDTMIFFYTLSFG
ILRVILHFIDLVNIYFRGMRLRRPSNLLILRGENSRGFRVLKHLLMLKAW
ILVIYGMVFIKPHYINPFVVLSIIILTIDVFVLVLDILRKARIPLDRRVT
LWEMMLNLCCVFYVQWILKQQIQY*
BS28503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43075-PA | 174 | CG43075-PA | 1..174 | 1..174 | 907 | 100 | Plus |
| CG33252-PA | 174 | CG33252-PA | 1..172 | 1..172 | 633 | 71.5 | Plus |
| CG32588-PA | 170 | CG32588-PA | 1..168 | 1..172 | 496 | 56.1 | Plus |
| CG9030-PB | 210 | CG9030-PB | 7..194 | 7..174 | 221 | 27.7 | Plus |
| CG43076-PA | 160 | CG43076-PA | 1..157 | 1..174 | 153 | 26.7 | Plus |
