BS28510.complete Sequence
323 bp assembled on 2012-03-26
GenBank Submission: KX805831
> BS28510.complete
GAAGTTATCAGTCGACATGGAATGCGAAGCTGCGGAGGGACGCGATTCGA
GCGAGGCAGATGAAGAAGATGTTAGCCCAAGCGGATGCAGAAGTAAAGTA
CGAAGAGGACAAGGGTCCATGACCAGGACCAGTCTGGACTGGAGGCGCTG
CCATGGATCGGGAGGAGGTCGAGGAGCAGCAGGGCGATGGGAATTCGAGA
AGGGGCAGCATCATCAGCAACAGCAGCATAAACAAAACGACCATCAGAGC
CGCAGGAACGGAAGAACCATACACTGGACGAAATCAAACCAAAGTAAGGA
AGGATGAAAGCTTTCTAGACCAT
BS28510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 04:06:56 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 04:06:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18946718..18947008 | 17..307 | 1455 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2290..2416 | 145..269 | 161 | 60.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2256..2405 | 153..297 | 160 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6870 | 175..269 | 157 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2439 | 198..279 | 155 | 68.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1086..1162 | 172..247 | 147 | 70.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6804 | 201..269 | 140 | 68.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1083..1176 | 201..292 | 140 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2490..2539 | 206..254 | 139 | 78 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1092..1155 | 198..260 | 137 | 70.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2779..2858 | 192..270 | 136 | 65 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6825 | 201..269 | 131 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2401 | 205..271 | 125 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6843 | 201..269 | 124 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6796 | 207..282 | 121 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..6913 | 172..247 | 121 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2888 | 206..287 | 119 | 63.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6862 | 206..274 | 119 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6896 | 207..267 | 119 | 71.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2368..2427 | 201..259 | 117 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2445 | 205..259 | 115 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6849..6898 | 198..247 | 115 | 70 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2277..2356 | 190..269 | 112 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1558..1601 | 201..243 | 109 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6797 | 193..267 | 109 | 63.7 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3290..3341 | 205..255 | 104 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2633..2665 | 205..237 | 102 | 78.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1056..1121 | 195..259 | 102 | 63.6 | Plus |
BS28510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:12:57 Download gff for
BS28510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42848-RA | 414..703 | 17..306 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:01 Download gff for
BS28510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18946718..18947007 | 17..306 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:01 Download gff for
BS28510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18946718..18947007 | 17..306 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:12 Download gff for
BS28510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18946718..18947007 | 17..306 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:12 Download gff for
BS28510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18946718..18947007 | 17..306 | 100 | | Plus |
BS28510.pep Sequence
Translation from 16 to 306
> BS28510.pep
MECEAAEGRDSSEADEEDVSPSGCRSKVRRGQGSMTRTSLDWRRCHGSGG
GRGAAGRWEFEKGQHHQQQQHKQNDHQSRRNGRTIHWTKSNQSKEG*
Sequence BS28510.pep has no blast hits.
