BS28511.complete Sequence
596 bp assembled on 2012-03-26
GenBank Submission: KX806489
> BS28511.complete
GAAGTTATCAGTCGACATGAGTCACATAACTCGAAAGCGTTTACTAACTT
TGGATGAGGAATCTCAGCATATCAATTCGACAAAACGATGTGGGAGCAAC
TGCATCGAGAAGATGTTAACAAAATGGTCCCGCCAAAGTATTCCAGGCGT
CAATAGCATTTCGCGGAAGCGATCGTTTCCTTGGGAGGATAACTCGCCTG
ATATATTTCCCGCAAAACATTCACGAAAGCATATCATAAAAAAGAAGTCG
AAAACAATTCACGAGCCAGAGGTCCCGATAGATTTTTTGATGGGACTGCC
AGTATTGCTTGATAGTGACTTTAGTGATTCGGAGGAATGTCGCCCAAAAT
CAGAGATTCATGTGGCCAAACCAGAAACTGAAGATAACCGAGATTTGTTT
ACCTATCAGCAATTGAAATTAATGTGCTGCGAAATGATGAAACAATGCGA
AGATCGGGTAGTACTGGAATATGAAATAGCATTGACTCAAAAAATGGCAG
AGCAGTATGATACATTCATCAAGTTCAACCACGACCAATTGCAGCGAGAA
TGTGAACATAGGGCTAGTTATTTGTCTTAGAAGCTTTCTAGACCAT
BS28511.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42830-RA | 564 | CG42830-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42830-RA | 720 | CG42830-RA | 67..633 | 15..581 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17812040..17812606 | 581..15 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:06:59 has no hits.
BS28511.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:12:58 Download gff for
BS28511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42830-RA | 1..564 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:13 Download gff for
BS28511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42830-RA | 69..632 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:01 Download gff for
BS28511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42830-RA | 69..632 | 17..580 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:01 Download gff for
BS28511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17812041..17812604 | 17..580 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:13 Download gff for
BS28511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17812041..17812604 | 17..580 | 100 | | Minus |
BS28511.pep Sequence
Translation from 16 to 579
> BS28511.pep
MSHITRKRLLTLDEESQHINSTKRCGSNCIEKMLTKWSRQSIPGVNSISR
KRSFPWEDNSPDIFPAKHSRKHIIKKKSKTIHEPEVPIDFLMGLPVLLDS
DFSDSEECRPKSEIHVAKPETEDNRDLFTYQQLKLMCCEMMKQCEDRVVL
EYEIALTQKMAEQYDTFIKFNHDQLQRECEHRASYLS*
BS28511.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42830-PA | 187 | CG42830-PA | 1..187 | 1..187 | 996 | 100 | Plus |
akirin-PF | 201 | CG8580-PF | 1..201 | 1..187 | 169 | 29.1 | Plus |
akirin-PE | 201 | CG8580-PE | 1..201 | 1..187 | 169 | 29.1 | Plus |
akirin-PD | 201 | CG8580-PD | 1..201 | 1..187 | 169 | 29.1 | Plus |
akirin-PC | 201 | CG8580-PC | 1..201 | 1..187 | 169 | 29.1 | Plus |