BS28515.complete Sequence
326 bp assembled on 2012-03-26
GenBank Submission: KX802050
> BS28515.complete
GAAGTTATCAGTCGACATGTTCAAGTTCTTCGCCGTCGCCCTCTTCGCAC
TGATTGCCTGCGTGGCCGCCAAGCCCGGAATCGTGGCTCCTCTGGCCTAC
TCCGCACCTCTGGTGGCTGCTGCTCCGGCGGCTGCGGTTTACAGCCGGGA
ATACCACGGAAATTTTGCGGCTCCCTACGTGGCATCTCCCTATGTGGCTT
CTCCCTACGTGGCTTCTCCCTACGTCGCTTCCCCTTACGTGGCGTCTCCG
TATGTGGCATCTCCCTACGTTGCCGCCCCCTACACCGCTCCTCTGCTGCT
GAAGAAGTAGAAGCTTTCTAGACCAT
BS28515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13069-RA | 294 | CG13069-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
| CG13051-RA | 252 | CG13051-PA | 1..89 | 17..105 | 355 | 93.3 | Plus |
| CG13051-RA | 252 | CG13051-PA | 91..156 | 173..238 | 210 | 87.9 | Plus |
| CG13051-RA | 252 | CG13051-PA | 91..162 | 218..289 | 195 | 84.7 | Plus |
| CG13051-RA | 252 | CG13051-PA | 89..141 | 231..283 | 190 | 90.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13069-RA | 420 | CG13069-RA | 46..339 | 17..310 | 1470 | 100 | Plus |
| CG13051-RA | 388 | CG13051-RA | 36..124 | 17..105 | 355 | 93.3 | Plus |
| CG13051-RA | 388 | CG13051-RA | 126..191 | 173..238 | 210 | 87.9 | Plus |
| CG13051-RA | 388 | CG13051-RA | 126..197 | 218..289 | 195 | 84.7 | Plus |
| CG13051-RA | 388 | CG13051-RA | 124..176 | 231..283 | 190 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16265430..16265723 | 17..310 | 1470 | 100 | Plus |
| 3L | 28110227 | 3L | 16264977..16265065 | 105..17 | 355 | 93.3 | Minus |
| 3L | 28110227 | 3L | 16264910..16264975 | 238..173 | 210 | 87.9 | Minus |
| 3L | 28110227 | 3L | 16264904..16264975 | 289..218 | 195 | 84.7 | Minus |
| 3L | 28110227 | 3L | 16264925..16264977 | 283..231 | 190 | 90.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:07:41 has no hits.
BS28515.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:06 Download gff for
BS28515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13069-RA | 51..339 | 22..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:36 Download gff for
BS28515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13069-RA | 51..339 | 22..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:22 Download gff for
BS28515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13069-RA | 51..339 | 22..310 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:22 Download gff for
BS28515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16265435..16265723 | 22..310 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:36 Download gff for
BS28515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16258535..16258823 | 22..310 | 100 | | Plus |
BS28515.pep Sequence
Translation from 16 to 309
> BS28515.pep
MFKFFAVALFALIACVAAKPGIVAPLAYSAPLVAAAPAAAVYSREYHGNF
AAPYVASPYVASPYVASPYVASPYVASPYVASPYVAAPYTAPLLLKK*
BS28515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13069-PA | 97 | CG13069-PA | 1..97 | 1..97 | 493 | 100 | Plus |
| CG13051-PA | 83 | CG13051-PA | 1..83 | 1..97 | 243 | 56.2 | Plus |
| CG13067-PA | 79 | CG13067-PA | 1..76 | 1..76 | 175 | 55 | Plus |
| CG18294-PA | 141 | CG18294-PA | 1..111 | 1..96 | 172 | 45.3 | Plus |
| CG12519-PB | 131 | CG12519-PB | 1..108 | 1..93 | 166 | 45.6 | Plus |
