Clone BS28520 Report

Search the DGRC for BS28520

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:285
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG14317-RA
Protein status:BS28520.pep: full length peptide match
Sequenced Size:1379

Clone Sequence Records

BS28520.complete Sequence

1379 bp assembled on 2012-03-26

GenBank Submission: KX802434

> BS28520.complete
GAAGTTATCAGTCGACATGTCGCAAATGCACAATACCGCATTCTACAAGG
ACGCTCTGGTTGCCCAGCAAAATAATACCTGTTCACCGATGGAGGAAATT
GAACCGAACTACATCGACAACCTGCACATTATATTTTTCGAGCAGATTTT
CGAAGAGATCGACAATCTGATCGATCAGGTACGCATGGCTAGGGCCTATC
CACAGTTCATGCCACAGATTCTCAAGTTCTGGCAGAGGCGACTGCACCTG
ATCATCGGTCCAAATACACCATTCCTTGGACTCCTGGACATCGATGACTA
TGTCTTCTTTATGGAACACATGGCTGATAGCTTCACGGATCTGCACGTTC
ACGACGGCGTTGGTTCCTTTTCTGAATTCTACGACTATATCACACACCTG
TGCGATATCAATATCACCAAGTTTCCCAAGGTGGACACTTGCATATTGGC
GGGCAATCCCAACACAGTGGTCGATGAGGACATCCGCGACTTGACGGTAA
TGTTGCCCAATCTCAAGCGCCTAATGACCTGCATGAATCTATCTGGCTTA
TATATGCGTGGCTTCAAGAAGTTGGAGGAGCTGGTATTCAACTCCTTGTA
CCATTCGGTGCCATTGGATAGCCGCTGGATTCAGGATATCTGTCTGACAA
TGACCAATTTGAGAGTCCTTGACATTACCGATCAGTTCGACAGTTGTGTG
AGACTCACAGACATCAAATTGCCCAATCTGGAAGTGCTAAAAATCAACTT
GAGCACCGTAGAATGCATGCTATCGGAGGTGCTGCAGTTGCCCAAGTTAC
AGAAACTATCCGTGCGATTCGATGATTCGCGGCAATTGAACGCAGATCAG
GAGACCATCTTCCAGCAGATTGTGGTGGCCAAAAGCGAAAGGATCACCCG
AATTGCCCTGAACAACGAAGTGGTTCAATTGCCAGCTCGGTGGCAGCAAA
GTTTGCTCCTCGAACTGCCCAAGCTGAGGAAGGTGATATGCGAGAATTGG
TGCCACAATGATTTCTTCCTGGATCGCCAGCACATGCCCTGCCAACAAAT
GGAGGTGCTCAGCTTCAGTGGCTGGGAGATTGTGCGGGAGACTCAGCTCC
TGGAACTGGTCGCCGAGTGCGTCAATCTGGAGCACTTGGCTCTGAACGGC
TACCACAGCAACTGGGAGAAACTTACTAAGCTCGTGAATATTCGCAATCA
GGAAAGGAATCCCAGACCACTGCAGGTGTTCAGCGACATGATGTGGGGCA
ACTTCACACCCGAGGAATATTATCACTGGCAGAGCAACAAATATGTTCAG
GTCACCTGTGACAGCAGCGAATACGAATATCAGGAGGATGGTTTCGAGTT
TGATTTTGAGTGAAAGCTTTCTAGACCAT

BS28520.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-RA 1347 CG14317-PA 1..1347 17..1363 6735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-RA 1536 CG14317-RA 74..1421 17..1364 6740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18081121..18082468 17..1364 6740 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:07:53 has no hits.

BS28520.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:08 Download gff for BS28520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1346 17..1362 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:41 Download gff for BS28520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1346 17..1362 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:27 Download gff for BS28520.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 74..1419 17..1362 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:27 Download gff for BS28520.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18081121..18082466 17..1362 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:41 Download gff for BS28520.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13906843..13908188 17..1362 100   Plus

BS28520.pep Sequence

Translation from 16 to 1362

> BS28520.pep
MSQMHNTAFYKDALVAQQNNTCSPMEEIEPNYIDNLHIIFFEQIFEEIDN
LIDQVRMARAYPQFMPQILKFWQRRLHLIIGPNTPFLGLLDIDDYVFFME
HMADSFTDLHVHDGVGSFSEFYDYITHLCDINITKFPKVDTCILAGNPNT
VVDEDIRDLTVMLPNLKRLMTCMNLSGLYMRGFKKLEELVFNSLYHSVPL
DSRWIQDICLTMTNLRVLDITDQFDSCVRLTDIKLPNLEVLKINLSTVEC
MLSEVLQLPKLQKLSVRFDDSRQLNADQETIFQQIVVAKSERITRIALNN
EVVQLPARWQQSLLLELPKLRKVICENWCHNDFFLDRQHMPCQQMEVLSF
SGWEIVRETQLLELVAECVNLEHLALNGYHSNWEKLTKLVNIRNQERNPR
PLQVFSDMMWGNFTPEEYYHWQSNKYVQVTCDSSEYEYQEDGFEFDFE*

BS28520.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-PA 448 CG14317-PA 1..448 1..448 2388 100 Plus
CG7148-PA 454 CG7148-PA 19..362 43..374 247 25.2 Plus