BS28522.complete Sequence
827 bp assembled on 2012-03-26
GenBank Submission: KX804990
> BS28522.complete
GAAGTTATCAGTCGACATGGGTGCGTCCAACCGCATTTTACAAGTTGCCC
TTTGCGCGTCCGTGTTTTCCCTAATATGTTTTGTTATCGCGTTTTCCACG
CCTTATTGGCTGGTTACAGACGGCAGATTACAAAACCCGCGATTCACTAA
CCTAGGCCTTTGGGAAGTTTGTTTCAACAACTTCCAGGACATACACCGAT
TTTTTGACAATTCCTTTAACGGATGCCTATGGGTTTTCGAAGAGGAATAT
TACATCATACACGACTTCCTCCTGCCTGGCTTCTACATATCCGTTCAACT
TTTTGCTACGCTATGCTTTGTAATGTGCCTTGTTGTTATACCACTCACTG
TAGCATTTCTTCGCACTTCTCGCGATGATGACAGGTACATGGTGCTCCTG
CTGGCGATAGGATCATGCCAGGTTGTGGGCTCTGTTTTCGGGTTTATTGC
TGTGGTCATTTTTGGCGCCAAAGGAGATTCTCGGGATTGGATGCCAGGAT
GGCAGAACAATGATATGGGCTGGTCATTTGCTCTGGGCGTTGTTGGCGCT
GTGCTGCTACTGCCGTCTGGCGTACTCTATCTAGTAGAAGCGCGTCGGGA
AAGGTACAAGCGCTTAAACGAAATCAGCAATCGGGAGATCAGTGAATACG
GAGATGAGTATTACCAGAATCAGGGACCCTCCGCAGTGCTTCCGACCGCT
CCATCGCCATATCAATCCTATTTTGCATCTGAGCCAAGCCGACCAAGAAG
ACCCCAACAAAGTAGTGCATCGAATTCCGCTGTACAAGGAGGAATTCAAA
CAGATATATAAAAGCTTTCTAGACCAT
BS28522.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:07:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kune-RA | 795 | CG1298-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:07:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kune-RA | 1060 | CG1298-RA | 95..890 | 17..812 | 3980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:07:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5671835..5672630 | 17..812 | 3980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:07:32 has no hits.
BS28522.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:04 Download gff for
BS28522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kune-RA | 64..856 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:31 Download gff for
BS28522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kune-RA | 95..887 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:17 Download gff for
BS28522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kune-RA | 95..887 | 17..809 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:17 Download gff for
BS28522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5671835..5672627 | 17..809 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:31 Download gff for
BS28522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1559340..1560132 | 17..809 | 100 | | Plus |
BS28522.pep Sequence
Translation from 16 to 810
> BS28522.pep
MGASNRILQVALCASVFSLICFVIAFSTPYWLVTDGRLQNPRFTNLGLWE
VCFNNFQDIHRFFDNSFNGCLWVFEEEYYIIHDFLLPGFYISVQLFATLC
FVMCLVVIPLTVAFLRTSRDDDRYMVLLLAIGSCQVVGSVFGFIAVVIFG
AKGDSRDWMPGWQNNDMGWSFALGVVGAVLLLPSGVLYLVEARRERYKRL
NEISNREISEYGDEYYQNQGPSAVLPTAPSPYQSYFASEPSRPRRPQQSS
ASNSAVQGGIQTDI*
BS28522.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kune-PA | 264 | CG1298-PA | 1..264 | 1..264 | 1399 | 100 | Plus |
sinu-PA | 247 | CG10624-PA | 44..233 | 16..200 | 312 | 38.9 | Plus |
pck-PC | 256 | CG14779-PC | 39..238 | 18..212 | 264 | 33 | Plus |
pck-PA | 256 | CG14779-PA | 39..238 | 18..212 | 264 | 33 | Plus |