BS28523.complete Sequence
656 bp assembled on 2012-03-26
GenBank Submission: KX805157
> BS28523.complete
GAAGTTATCAGTCGACATGAAGATCCGCAAGAATCATGCTCGCAAGCGTT
ATCGCTACAATGTAAACCGCAAGACGATGAATAAAACCCGGAGTTCCACC
GGAAAAATTAAGGATCCCAGGATGAAAAAGATGTGGATGGAGGACCAGCG
TGTGGGCACCAACTTCAGTGAAATGGGGTTGGCCAAGGACGTCAACAAGG
CCATTGCGATTCCCAGCTACAAGAAGGACCGCCTCCTAGCGGCCCGAGTT
GTGAATGGGTTTCTGGAGGAGGAGCTGGACGAGGATGAGCGGCGTGTATT
GGGCCTCAAGAAACCAGTCGTAGAGGAGGGTCCAAAACGTGGACACGTAG
TCCAGGAACTAGAACAACTGGCTAGCGAGCGAGCCGACCCAGAGTTCAGA
TTACCCAAGGGCGTGGTCAAGGAACTGTCCTACTTTCTTAACAAACATAA
GTTTAACTACAAGGCGATGGTTGCCGATCGGAAAAACTTTGGCCAGTGGA
CGTGGCGGCAGTTCCGCTTGAAGATTCGCAGATTTATGTCGATTCCGGAG
CAGTTTAACGTTTACCTGGAGCAGAAGAAGTTGCCCGTGGGCGTGAAACC
GGACTGGGAGGAATACGAGTCGGACAGTGAATGGAAATAAAAGCTTTCTA
GACCAT
BS28523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11563-RA | 624 | CG11563-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11563-RA | 831 | CG11563-RA | 108..731 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31737316..31737600 | 115..399 | 1425 | 100 | Plus |
| 3R | 32079331 | 3R | 31737656..31737899 | 397..640 | 1220 | 100 | Plus |
| 3R | 32079331 | 3R | 31737142..31737239 | 17..114 | 490 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 4564..4627 | 61..125 | 106 | 64.6 | Plus |
BS28523.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:41 Download gff for
BS28523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 118..739 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:18 Download gff for
BS28523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 108..729 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:45 Download gff for
BS28523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11563-RA | 108..729 | 17..638 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:45 Download gff for
BS28523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31737142..31737239 | 17..114 | 100 | -> | Plus |
| 3R | 31737316..31737600 | 115..399 | 100 | -> | Plus |
| 3R | 31737659..31737897 | 400..638 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:18 Download gff for
BS28523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27563038..27563322 | 115..399 | 100 | -> | Plus |
| arm_3R | 27563381..27563619 | 400..638 | 100 | | Plus |
| arm_3R | 27562864..27562961 | 17..114 | 100 | -> | Plus |
BS28523.pep Sequence
Translation from 16 to 639
> BS28523.pep
MKIRKNHARKRYRYNVNRKTMNKTRSSTGKIKDPRMKKMWMEDQRVGTNF
SEMGLAKDVNKAIAIPSYKKDRLLAARVVNGFLEEELDEDERRVLGLKKP
VVEEGPKRGHVVQELEQLASERADPEFRLPKGVVKELSYFLNKHKFNYKA
MVADRKNFGQWTWRQFRLKIRRFMSIPEQFNVYLEQKKLPVGVKPDWEEY
ESDSEWK*
BS28523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11563-PA | 207 | CG11563-PA | 1..207 | 1..207 | 1090 | 100 | Plus |
