BS28528.complete Sequence
386 bp assembled on 2012-03-26
GenBank Submission: KX802496
> BS28528.complete
GAAGTTATCAGTCGACATGAAGAGCCTTCTGAGTCTGTCGACAGTCCTGT
TTGTCCTGTCATTCGCGTGTGTGGTCCTGGCCAACAGCAGTAGCAGCAGT
TCCACACCCAAGTTATGTGTCCTGCGGAACTGCAACTGGAACTCCACCAC
GAATGCCTGTGGCCGCTTTGGTCGCTCCAATCTGTGCAATCGCTTTAAGA
ACAGCTGCACCCTGCGATATGAATCCTGCGTGGGATCCACCACATACACG
GCGGTCAGTCTGTCCCAGTGTTCCGGGATCAGCGTGGGTTCCCGTGGAAC
CTGCGGAGGATCGTCGTCGTCCTCCTCCTCGTCATCGAATGTTGTACCCA
TAATCATACGCAGGGGATGAAAGCTTTCTAGACCAT
BS28528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13170-RA | 354 | CG13170-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13170-RA | 415 | CG13170-RA | 11..364 | 17..370 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:08:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12240409..12240762 | 17..370 | 1770 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7878..7927 | 333..286 | 119 | 74 | Minus |
BS28528.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:11 Download gff for
BS28528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13170-RA | 1..353 | 17..369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:10:48 Download gff for
BS28528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13170-RA | 11..363 | 17..369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:20:33 Download gff for
BS28528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13170-RA | 11..363 | 17..369 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:20:33 Download gff for
BS28528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12240409..12240761 | 17..369 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:10:48 Download gff for
BS28528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8127914..8128266 | 17..369 | 100 | | Plus |
BS28528.pep Sequence
Translation from 16 to 369
> BS28528.pep
MKSLLSLSTVLFVLSFACVVLANSSSSSSTPKLCVLRNCNWNSTTNACGR
FGRSNLCNRFKNSCTLRYESCVGSTTYTAVSLSQCSGISVGSRGTCGGSS
SSSSSSSNVVPIIIRRG*
BS28528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13170-PA | 117 | CG13170-PA | 1..117 | 1..117 | 599 | 100 | Plus |
CG43316-PA | 191 | CG13169-PA | 71..191 | 22..117 | 168 | 35.5 | Plus |
CG43315-PB | 102 | CG43315-PB | 1..102 | 1..101 | 158 | 33.7 | Plus |
CG43315-PA | 120 | CG13169-PA | 38..120 | 20..101 | 137 | 34.1 | Plus |