BS28529.complete Sequence
590 bp assembled on 2012-03-26
GenBank Submission: KX802519
> BS28529.complete
GAAGTTATCAGTCGACATGTGGCAATTGTTGATAGTCTTGGCCTGCCTGT
TACCTGGCTACCTCTGGGTGCAGGTGCAGGCGGTTTTTCTCGAGGAATGC
AAAGGTGTGATCATCAATAAGGTGACCAATGAGAATCAGGAGTGCAGTGA
GTTTGTTCACTGCGATGGCGATGATTCCTACTACTGCAATGGGGATTGTC
GTGAGGCCGTGGAGTGTTATACCAATGTGGTTACCACACCGGTTACCACA
TTAAGACCCATAGGAACCTCTACGGAACGAGCACCATCCGCAGAGCCAGT
CAATACTACATCTACGACTTTAGCTACTACCACGCCAACAACGATTGCTG
TAACCACGACTACAAGCCAAGTTCCGAGCACCGATGTCTATGTCATCTGC
AAGACGAGTGGAAGGAACGGGGTCTATCCCTATCCGGCAAATAGCAATTA
CTATTATCAGTGTATTTCCGGTTATCTGTTGCTCCAGCAGTGCCCACAGA
ATTTCCATTTCGATGTCGCCCAGGGACAGTGCGTTGCCACAAAACCCAAT
CGTTCATCGGGCTTACGTTTGTAAAAGCTTTCTAGACCAT
BS28529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42729-RA | 558 | CG42729-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:11:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42729-RA | 607 | CG42729-RA | 9..566 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:11:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15526951..15527508 | 574..17 | 2790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:11:06 has no hits.
BS28529.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:43 Download gff for
BS28529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42729-RA | 1..556 | 17..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:23 Download gff for
BS28529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42729-RA | 9..564 | 17..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:21:49 Download gff for
BS28529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42729-RA | 9..564 | 17..572 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:21:49 Download gff for
BS28529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15526953..15527508 | 17..572 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:23 Download gff for
BS28529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15520053..15520608 | 17..572 | 100 | | Minus |
BS28529.pep Sequence
Translation from 16 to 573
> BS28529.pep
MWQLLIVLACLLPGYLWVQVQAVFLEECKGVIINKVTNENQECSEFVHCD
GDDSYYCNGDCREAVECYTNVVTTPVTTLRPIGTSTERAPSAEPVNTTST
TLATTTPTTIAVTTTTSQVPSTDVYVICKTSGRNGVYPYPANSNYYYQCI
SGYLLLQQCPQNFHFDVAQGQCVATKPNRSSGLRL*
BS28529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42729-PA | 185 | CG42729-PA | 1..185 | 1..185 | 1000 | 100 | Plus |
CG42728-PA | 156 | CG42728-PA | 10..152 | 4..172 | 163 | 28.2 | Plus |
CG33263-PA | 227 | CG33263-PA | 12..214 | 11..172 | 159 | 23.7 | Plus |